RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	FBXW11	Q9UKB1	542 aa		18.94	■□□□□ 0.62
PKM-223	ENST00000569050	BRPF3	Q9ULD4	1205 aa		18.94	■□□□□ 0.62
PKM-223	ENST00000569050	DOCK6	Q96HP0	2047 aa		18.94	■□□□□ 0.62
PKM-223	ENST00000569050	ASPM	Q8IZT6	3477 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	ARL5C	A6NH57	179 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	SHISA7	A6NL88	538 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	ITGA4	P13612	1032 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	CDC27	P30260	824 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	PFKFB3	Q16875	520 aa	Predicted RBP	18.93	■□□□□ 0.62
PKM-223	ENST00000569050	USP41	Q3LFD5	358 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	LRCH2	Q5VUJ6	765 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	LAIR1	Q6GTX8	287 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	GPR65	Q8IYL9	337 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	ZFP42	Q96MM3	310 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	PHF20	Q9BVI0	1012 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	TEKT3	Q9BXF9	490 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	IPP	Q9Y573	584 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	COL4A3BP	Q9Y5P4	624 aa		18.93	■□□□□ 0.62
PKM-223	ENST00000569050	MTCL1	Q9Y4B5	1905 aa	Known RBP	18.93	■□□□□ 0.62
PKM-223	ENST00000569050	ZBTB43	O43298	467 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	AAMP	Q13685	434 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.92	■□□□□ 0.62
PKM-223	ENST00000569050	MIER3	Q7Z3K6	550 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	NELL2	Q99435	816 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	EIF2A	Q9BY44	585 aa	Known RBP	18.92	■□□□□ 0.62
PKM-223	ENST00000569050	LSG1	Q9H089	658 aa	Known RBP	18.92	■□□□□ 0.62
PKM-223	ENST00000569050	UBN1	Q9NPG3	1134 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	ANGPTL2	Q9UKU9	493 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	RAB23	Q9ULC3	237 aa		18.92	■□□□□ 0.62
PKM-223	ENST00000569050	NCAM2	O15394	837 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	CCL16	O15467	120 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	RET	P07949	1114 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	KCNA4	P22459	653 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	CREM	Q03060	361 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	RTP2	Q5QGT7	225 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	CREB3L3	Q68CJ9	461 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	PLA2G4F	Q68DD2	849 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	PRR23C	Q6ZRP0	262 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	ANO5	Q75V66	913 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	SRGAP1	Q7Z6B7	1085 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	NPAS3	Q8IXF0	933 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	RDM1	Q8NG50	284 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	COLEC11	Q9BWP8	271 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	C6orf50	Q9HD87	102 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	HEBP1	Q9NRV9	189 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	SEMA4G	Q9NTN9	838 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	HES2	Q9Y543	173 aa		18.91	■□□□□ 0.62
PKM-223	ENST00000569050	GOLGA8A	A7E2F4	631 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	DDX11L8	A8MPP1	907 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	GOLGA8B	A8MQT2	603 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	GDF9	O60383	454 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	LRP3	O75074	770 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	PSMD10	O75832	226 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	C8A	P07357	584 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
PKM-223	ENST00000569050	PML	P29590	882 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	ADCY1	Q08828	1119 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	DMWD	Q09019	674 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	LIN9	Q5TKA1	542 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	B3GNT9	Q6UX72	402 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	ZNF852	Q6ZMS4	543 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	PRR23B	Q6ZRT6	265 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	ZNF687	Q8N1G0	1237 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	CELF5	Q8N6W0	485 aa	Known RBP	18.9	■□□□□ 0.62
PKM-223	ENST00000569050	CNNM3	Q8NE01	707 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	RABGGTA	Q92696	567 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	CCDC136	Q96JN2	1154 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	TCEANC2	Q96MN5	208 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	ADAM28	Q9UKQ2	775 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	POLI	Q9UNA4	740 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	CEP295	Q9C0D2	2601 aa		18.9	■□□□□ 0.62
PKM-223	ENST00000569050	NR1I2	O75469	434 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	SRGAP2C	P0DJJ0	459 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	PPM1L	Q5SGD2	360 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	JPH2	Q9BR39	696 aa	Predicted RBP	18.89	■□□□□ 0.61
PKM-223	ENST00000569050	PLA2G2F	Q9BZM2	168 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	CHRD	Q9H2X0	955 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	HCFC1R1	Q9NWW0	138 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	SPEG	Q15772	3267 aa		18.89	■□□□□ 0.61
PKM-223	ENST00000569050	CNOT1	A5YKK6	2376 aa	Known RBP	18.89	■□□□□ 0.61
PKM-223	ENST00000569050	HOXA9	P31269	272 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	NECTIN1	Q15223	517 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	CSRP2	Q16527	193 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	ZNF579	Q8NAF0	562 aa	Known RBP	18.88	■□□□□ 0.61
PKM-223	ENST00000569050	GSTCD	Q8NEC7	633 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	PRPF31	Q8WWY3	499 aa	Known RBP	18.88	■□□□□ 0.61
PKM-223	ENST00000569050	ING5	Q8WYH8	240 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	TMEM143	Q96AN5	459 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	CLSTN3	Q9BQT9	956 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	APOL6	Q9BWW8	343 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	CACNG4	Q9UBN1	327 aa		18.88	■□□□□ 0.61
PKM-223	ENST00000569050	MRPS17	Q9Y2R5	130 aa	Known RBP	18.88	■□□□□ 0.61
PKM-223	ENST00000569050	ZZEF1	O43149	2961 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	TSPAN1	O60635	241 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	XYLB	O75191	536 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	ECI2	O75521	394 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	HOXB3	P14651	431 aa	Predicted RBP	18.87	■□□□□ 0.61
PKM-223	ENST00000569050	GNA11	P29992	359 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	NRL	P54845	237 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	NPEPPS	P55786	919 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms