RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MTMR9Q96QG7 549 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 TANGO6Q9C0B7 1094 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 PHACTR1Q9C0D0 580 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 FAM192AQ9GZU8 254 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 SEMA6BQ9H3T3 888 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 RIC8AQ9NPQ8 531 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 HAO1Q9UJM8 370 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 A0A1W2PRG0 241 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 MARCH6O60337 910 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 FAM200BP0CF97 657 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 DESP17661 470 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 TARSP26639 723 aaKnown RBP15.02■□□□□ -0
GTF3C1-203ENST00000562609 CNPY1Q3B7I2 92 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 LARGE2Q8N3Y3 721 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 ANKRD42Q8N9B4 389 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 GDAP1Q8TB36 358 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 YIPF2Q9BWQ6 316 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 TRIM9Q9C026 710 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 TJP3O95049 919 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 KCNMA1Q12791 1236 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 CCDC6Q16204 474 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 MIGA2Q7L4E1 593 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 KCNK18Q7Z418 384 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 LRRC8CQ8TDW0 803 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 AZIN2Q96A70 460 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 CARD9Q9H257 536 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 SEMA4AQ9H3S1 761 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 ZDHHC18Q9NUE0 388 aa15.02■□□□□ -0
GTF3C1-203ENST00000562609 TNS1Q9HBL0 1735 aaKnown RBP15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 SIGLEC16A6NMB1 481 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 PFDN1O60925 122 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 EPHB2P29323 1055 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 VHLP40337 213 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 USP46P62068 366 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 GRB10Q13322 594 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 ZYXQ15942 572 aaKnown RBP15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 TATDN1Q6P1N9 297 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 INTS8Q75QN2 995 aaKnown RBP15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 EXOC3L1Q86VI1 746 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 DNAAF5Q86Y56 855 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 P2RX7Q99572 595 aaKnown RBP15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 STMN4Q9H169 189 aaPredicted RBP15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 MYLK2Q9H1R3 596 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 DENND2DQ9H6A0 471 aaPredicted RBP15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 RMI1Q9H9A7 625 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 STOML1Q9UBI4 398 aa15.02□□□□□ -0.01
GTF3C1-203ENST00000562609 TMEM120BA0PK00 339 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 MAGEA13PA6NCF6 341 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 RASGRF2O14827 1237 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 NDUFB10O96000 172 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 DPEP1P16444 411 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 INHBCP55103 352 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 BPIFB4P59827 614 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 AUHQ13825 339 aaKnown RBP15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 ECM1Q16610 540 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 RNF43Q68DV7 783 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 CALML4Q96GE6 196 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 AK8Q96MA6 479 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 TBC1D10AQ9BXI6 508 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 DDX25Q9UHL0 483 aaKnown RBP15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 MYO3BQ8WXR4 1341 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 hCG_2014768A0A024R1R8 64 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 CREB1P16220 341 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 POLR2FP61218 127 aaKnown RBP15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 FAM83BQ5T0W9 1011 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 CGB2Q6NT52 195 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 TTLL6Q8N841 843 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 FBXO25Q8TCJ0 367 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 SNX29Q8TEQ0 813 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 SCG3Q8WXD2 468 aaKnown RBP15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 HAS1Q92839 578 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 ERP27Q96DN0 273 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 PNMA5Q96PV4 448 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 DDX50Q9BQ39 737 aaKnown RBP15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 DCLRE1BQ9H816 532 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 NR2E1Q9Y466 385 aa15.01□□□□□ -0.01
GTF3C1-203ENST00000562609 RAPGEF1Q13905 1077 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 WASHC2DQ5SRD0 308 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 SNX30Q5VWJ9 437 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 CEP128Q6ZU80 1094 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 PEX26Q7Z412 305 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 CDK5RAP3Q96JB5 506 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 NYAP2Q9P242 653 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 PDP2Q9P2J9 529 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 INTUQ9ULD6 942 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 SNX24Q9Y343 169 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 GNA14O95837 355 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 ZBTB48P10074 688 aaPredicted RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 COPB2P35606 906 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 CLK2P49760 499 aaKnown RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 POU5F1Q01860 360 aaKnown RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 Q4G0T1 1027 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 RBM26Q5T8P6 1007 aaKnown RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 ZNF365Q70YC5 407 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 ADAT2Q7Z6V5 191 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms