RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 TBKBP1A7MCY6 615 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 SOX1O00570 391 aaPredicted RBP15.32■□□□□ 0.04
IFT140-205ENST00000561954 MYBP10242 640 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 CASP1P29466 404 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 MATR3P43243 847 aaKnown RBP eCLIP15.32■□□□□ 0.04
IFT140-205ENST00000561954 MCL1Q07820 350 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 KCNB1Q14721 858 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 ZC2HC1CQ53FD0 456 aaPredicted RBP15.32■□□□□ 0.04
IFT140-205ENST00000561954 SLFN12LQ6IEE8 588 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 CDR2LQ86X02 465 aaPredicted RBP15.32■□□□□ 0.04
IFT140-205ENST00000561954 SYCP3Q8IZU3 236 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 SMG8Q8ND04 991 aaKnown RBP15.32■□□□□ 0.04
IFT140-205ENST00000561954 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
IFT140-205ENST00000561954 CDT1Q9H211 546 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
IFT140-205ENST00000561954 LCHNA4D1U4 455 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 LINC01553A4QN01 128 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 KLRC4O43908 158 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 RHOBTB3O94955 611 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 GRM5P41594 1212 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 FXR1P51114 621 aaKnown RBP eCLIP15.31■□□□□ 0.04
IFT140-205ENST00000561954 CASP5P51878 434 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
IFT140-205ENST00000561954 HSP90AA2PQ14568 343 aaPredicted RBP15.31■□□□□ 0.04
IFT140-205ENST00000561954 KMT5BQ4FZB7 885 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 PAN2Q504Q3 1202 aaKnown RBP15.31■□□□□ 0.04
IFT140-205ENST00000561954 CLLU1OSQ5K130 101 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 EEF1DP3Q658K8 133 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 HELQQ8TDG4 1101 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 SMARCE1Q969G3 411 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 LRCH3Q96II8 777 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 GSDMAQ96QA5 445 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
IFT140-205ENST00000561954 RPS6KC1Q96S38 1066 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
IFT140-205ENST00000561954 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 INPPL1O15357 1258 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 RECQL4O94761 1208 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 HARSP12081 509 aaKnown RBP15.3■□□□□ 0.04
IFT140-205ENST00000561954 MYOGP15173 224 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 LAG3P18627 525 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 MLH1P40692 756 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
IFT140-205ENST00000561954 TAP1Q03518 808 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 PNOCQ13519 176 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 BMT2Q1RMZ1 405 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 CHD9Q3L8U1 2897 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 NOMO2Q5JPE7 1267 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 AGMOQ6ZNB7 445 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 EPM2AIP1Q7L775 607 aaPredicted RBP15.3■□□□□ 0.04
IFT140-205ENST00000561954 HS2ST1Q7LGA3 356 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 GOLGA5Q8TBA6 731 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 CLP1Q92989 425 aaKnown RBP15.3■□□□□ 0.04
IFT140-205ENST00000561954 LPPQ93052 612 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 CASD1Q96PB1 797 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 MSTO1Q9BUK6 570 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 APOL6Q9BWW8 343 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 RNF19AQ9NV58 838 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
IFT140-205ENST00000561954 PARP2Q9UGN5 583 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 USP20Q9Y2K6 914 aa15.3■□□□□ 0.04
IFT140-205ENST00000561954 GBF1Q92538 1859 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 ARL5CA6NH57 179 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 ABLIM1O14639 778 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 KIAA0391O15091 583 aaKnown RBP15.29■□□□□ 0.04
IFT140-205ENST00000561954 OGTO15294 1046 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 MBD3O95983 291 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
IFT140-205ENST00000561954 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
IFT140-205ENST00000561954 ZBTB33Q86T24 672 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 HPS3Q969F9 1004 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 FGFBP2Q9BYJ0 223 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 GBP3Q9H0R5 595 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 ZNF576Q9H609 170 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 SLC39A2Q9NP94 309 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 HES2Q9Y543 173 aa15.29■□□□□ 0.04
IFT140-205ENST00000561954 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.29■□□□□ 0.04
IFT140-205ENST00000561954 MRPL42Q9Y6G3 142 aaKnown RBP15.29■□□□□ 0.04
IFT140-205ENST00000561954 A0A0B4J269 797 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 OFD1O75665 1012 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
IFT140-205ENST00000561954 CLTAP09496 248 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 GARTP22102 1010 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 AKAP5P24588 427 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 CTNNB1P35222 781 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 PPM1AP35813 382 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 GATMP50440 423 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 GRIK3Q13003 919 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 KIAA0895Q8NCT3 520 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 SPATA20Q8TB22 786 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 SCFD1Q8WVM8 642 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 POMGNT1Q8WZA1 660 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 SNTG2Q9NY99 539 aa15.28■□□□□ 0.04
IFT140-205ENST00000561954 GDAQ9Y2T3 454 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms