RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LAMA2P24043 3122 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 LCHNA4D1U4 455 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 HNRNPDLO14979 420 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 CLDN3O15551 220 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 GTPBP6O43824 516 aaPredicted RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 NPTXRO95502 500 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 FGFR1P11362 822 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 LIG1P18858 919 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 PPM1AP35813 382 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 LIG4P49917 911 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 POU5F1Q01860 360 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 COASYQ13057 564 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 PSMD2Q13200 908 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 ZNF568Q3ZCX4 644 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 LONRF3Q496Y0 759 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 CLLU1OSQ5K130 101 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 L1TD1Q5T7N2 865 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 KRBA2Q6ZNG9 492 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 FMR1NBQ8N0W7 255 aaPredicted RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 RNF169Q8NCN4 708 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 BICD1Q96G01 975 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 PAGE5Q96GU1 130 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 C11orf84Q9BUA3 381 aaPredicted RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 EIF2AQ9BY44 585 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 GTPBP4Q9BZE4 634 aaKnown RBP15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 RNF19AQ9NV58 838 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 LMCD1Q9NZU5 365 aa15.32■□□□□ 0.04
PKNOX1-209ENST00000560448 OFD1O75665 1012 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 BMPR1AP36894 532 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 GRM5P41594 1212 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 MCL1Q07820 350 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 EHHADHQ08426 723 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 HSP90AA2PQ14568 343 aaPredicted RBP15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 NOLC1Q14978 699 aaKnown RBP eCLIP15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 POSTNQ15063 836 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 TMEM192Q8IY95 271 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 ACCSQ96QU6 501 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 TSPAN18Q96SJ8 248 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 GAS2L1Q99501 681 aaPredicted RBP15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 TCHPQ9BT92 498 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 TARS2Q9BW92 718 aaKnown RBP15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 MTMR10Q9NXD2 777 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 PCDHB12Q9Y5F1 795 aa15.31■□□□□ 0.04
PKNOX1-209ENST00000560448 KIAA0391O15091 583 aaKnown RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 KIF20AO95235 890 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 GCNT3O95395 438 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 LINC00271P0C7V0 271 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 POU3F3P20264 500 aaPredicted RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 NMT1P30419 496 aaKnown RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 AFMP43652 599 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 YARSP54577 528 aaKnown RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 UBE3AQ05086 875 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 HELQQ8TDG4 1101 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 STAMQ92783 540 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 NXF3Q9H4D5 531 aaKnown RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 MRPL42Q9Y6G3 142 aaKnown RBP15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 STYXL1Q9Y6J8 313 aa15.3■□□□□ 0.04
PKNOX1-209ENST00000560448 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 H3BNC9 293 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 ABLIM1O14639 778 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 NR1I2O75469 434 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 EDN1P05305 212 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 MRE11P49959 708 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 GRIK3Q13003 919 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 PAN2Q504Q3 1202 aaKnown RBP15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 RPS6KC1Q96S38 1066 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 TMEM175Q9BSA9 504 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 LMAN2LQ9H0V9 348 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 CDT1Q9H211 546 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 TYW1Q9NV66 732 aaKnown RBP15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 NLRC5Q86WI3 1866 aa15.29■□□□□ 0.04
PKNOX1-209ENST00000560448 ARL5CA6NH57 179 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 KINO60870 393 aaKnown RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 IBSPP21815 317 aaPredicted RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 CTNNB1P35222 781 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 ALDH7A1P49419 539 aaKnown RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 CUL4BQ13620 913 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 KCNB1Q14721 858 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 GRIN2CQ14957 1233 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 PTPROQ16827 1216 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 CCDC183Q5T5S1 534 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 EEF1DP3Q658K8 133 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 LRSAM1Q6UWE0 723 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 ARNTL2Q8WYA1 636 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 LPPQ93052 612 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms