RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ZBTB41Q5SVQ8 909 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 ANO5Q75V66 913 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 RNF168Q8IYW5 571 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-219ENST00000556432 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
ACTN1-219ENST00000556432 CEP170P1Q96L14 293 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 KXD1Q9BQD3 176 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 EIF2AQ9BY44 585 aaKnown RBP15.56■□□□□ 0.08
ACTN1-219ENST00000556432 GPR62Q9BZJ7 368 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 TRIM6Q9C030 488 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-219ENST00000556432 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 LTB4R2Q9NPC1 389 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 CHST7Q9NS84 486 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 VPS54Q9P1Q0 977 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 HES2Q9Y543 173 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 COL4A3Q01955 1670 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 MYH15Q9Y2K3 1946 aa15.56■□□□□ 0.08
ACTN1-219ENST00000556432 KCNA4P22459 653 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 MAGEA9P43362 315 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 DSC1Q08554 894 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 NCBP1Q09161 790 aaKnown RBP15.55■□□□□ 0.08
ACTN1-219ENST00000556432 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 TSSK4Q6SA08 328 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 PRSS55Q6UWB4 352 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-219ENST00000556432 TPRG1Q6ZUI0 275 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 HACE1Q8IYU2 909 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 TBCKQ8TEA7 893 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 RABGGTAQ92696 567 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 FGF13Q92913 245 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 DDX23Q9BUQ8 820 aaKnown RBP15.55■□□□□ 0.08
ACTN1-219ENST00000556432 PHF20Q9BVI0 1012 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 OSBPL6Q9BZF3 934 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 EPC1Q9H2F5 836 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 SLKQ9H2G2 1235 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-219ENST00000556432 FNIP2Q9P278 1114 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 ADAM28Q9UKQ2 775 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 RAB23Q9ULC3 237 aa15.55■□□□□ 0.08
ACTN1-219ENST00000556432 NCAM2O15394 837 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 CCL16O15467 120 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 PRPF3O43395 683 aaKnown RBP15.54■□□□□ 0.08
ACTN1-219ENST00000556432 XYLBO75191 536 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 TADA2AO75478 443 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 PAPLNO95428 1278 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 TDP2O95551 362 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 C1RP00736 705 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 NOTUMQ6P988 496 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 LILRA6Q6PI73 481 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 EXOC8Q8IYI6 725 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 ZBTB44Q8NCP5 570 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 CPB2Q96IY4 423 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 SLC26A6Q9BXS9 759 aa15.54■□□□□ 0.08
ACTN1-219ENST00000556432 SF3B1O75533 1304 aaKnown RBP eCLIP15.53■□□□□ 0.08
ACTN1-219ENST00000556432 PATJQ8NI35 1801 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 EDIL3O43854 480 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 TBC1D4O60343 1298 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 EFEMP2O95967 443 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 C8AP07357 584 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 HNRNPA1P09651 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
ACTN1-219ENST00000556432 RFC5P40937 340 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 QARSP47897 775 aaKnown RBP15.53■□□□□ 0.08
ACTN1-219ENST00000556432 NLRP5P59047 1200 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 LPAL2Q16609 132 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 ADCK5Q3MIX3 580 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 Q4G0T1 1027 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 RSPO2Q6UXX9 243 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-219ENST00000556432 CEP57Q86XR8 500 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 ZNF579Q8NAF0 562 aaKnown RBP15.53■□□□□ 0.08
ACTN1-219ENST00000556432 HASPINQ8TF76 798 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 TCP11Q8WWU5 503 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 CCDC51Q96ER9 411 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 MIOSQ9NXC5 875 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 FBXW11Q9UKB1 542 aa15.53■□□□□ 0.08
ACTN1-219ENST00000556432 MTCL1Q9Y4B5 1905 aaKnown RBP15.53■□□□□ 0.08
ACTN1-219ENST00000556432 INO80B-WBP1J3KQ70 363 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 TSPAN1O60635 241 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 DKC1O60832 514 aaKnown RBP eCLIP15.52■□□□□ 0.08
ACTN1-219ENST00000556432 ADRB1P08588 477 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 TARSP26639 723 aaKnown RBP15.52■□□□□ 0.08
ACTN1-219ENST00000556432 AXLP30530 894 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 SPEM2Q0P670 501 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 KRT32Q14532 448 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 EMC2Q15006 297 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 PPM1JQ5JR12 505 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 GPR65Q8IYL9 337 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 ITFG1Q8TB96 612 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 ING5Q8WYH8 240 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 NELL2Q99435 816 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 C22orf23Q9BZE7 217 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 CSRNP2Q9H175 543 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 NXF3Q9H4D5 531 aaKnown RBP15.52■□□□□ 0.08
ACTN1-219ENST00000556432 MRPS17Q9Y2R5 130 aaKnown RBP15.52■□□□□ 0.08
ACTN1-219ENST00000556432 GIT1Q9Y2X7 761 aa15.52■□□□□ 0.08
ACTN1-219ENST00000556432 TDRD15B5MCY1 1934 aaKnown RBP15.52■□□□□ 0.07
ACTN1-219ENST00000556432 DOCK6Q96HP0 2047 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 CHD6Q8TD26 2715 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 LILRB5O75023 590 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
ACTN1-219ENST00000556432 AKAP5P24588 427 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms