RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CD209Q9NNX6 404 aa4.84□□□□□ -1.63
ATXN3-240ENST00000556339 ACTR10Q9NZ32 417 aa4.84□□□□□ -1.63
ATXN3-240ENST00000556339 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.63
ATXN3-240ENST00000556339 SCN9AQ15858 1988 aa4.84□□□□□ -1.64
ATXN3-240ENST00000556339 MYH3P11055 1940 aa4.84□□□□□ -1.64
ATXN3-240ENST00000556339 AK9Q5TCS8 1911 aa4.84□□□□□ -1.64
ATXN3-240ENST00000556339 ADAMTSL1Q8N6G6 1762 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 DDX60Q8IY21 1712 aaKnown RBP4.83□□□□□ -1.64
ATXN3-240ENST00000556339 KIAA0100Q14667 2235 aaKnown RBP4.83□□□□□ -1.64
ATXN3-240ENST00000556339 SNAP23O00161 211 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 WNT10BO00744 389 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 DDAH1O94760 285 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 FBXO21O94952 628 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 CSF1RP07333 972 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 SREBF2Q12772 1141 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 NFATC3Q12968 1075 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 HS1BP3Q53T59 392 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 ACBD5Q5T8D3 534 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-240ENST00000556339 SLFN13Q68D06 897 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 VASNQ6EMK4 673 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 OTUD7BQ6GQQ9 843 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 CRIP3Q6Q6R5 217 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 CTU1Q7Z7A3 348 aaKnown RBP4.83□□□□□ -1.64
ATXN3-240ENST00000556339 RALYLQ86SE5 291 aaKnown RBP4.83□□□□□ -1.64
ATXN3-240ENST00000556339 PHOSPHO1Q8TCT1 267 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 ZCCHC14Q8WYQ9 949 aaKnown RBP4.83□□□□□ -1.64
ATXN3-240ENST00000556339 PLA2G12BQ9BX93 195 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 ZNF341Q9BYN7 854 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 SAGE1Q9NXZ1 904 aa4.83□□□□□ -1.64
ATXN3-240ENST00000556339 MED23Q9ULK4 1368 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 SPEF2Q9C093 1822 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CLRN2A0PK11 232 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 OVOL3O00110 214 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 GRM8O00222 908 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 AGRPO00253 132 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 ALDH1L1O75891 902 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 SSBP05455 408 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 LCP1P13796 627 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 VAMP1P23763 118 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 HIBADHP31937 336 aaKnown RBP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 EPHB4P54760 987 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 MFAP1P55081 439 aaKnown RBP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 SOX10P56693 466 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 HDLBPQ00341 1268 aaKnown RBP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CHAF1AQ13111 956 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CDSNQ15517 529 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 PKN2Q16513 984 aaKnown RBP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 ZNF568Q3ZCX4 644 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CFAP100Q494V2 611 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 TNNI3KQ59H18 835 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CAVIN4Q5BKX8 364 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 BEND3Q5T5X7 828 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CENPQQ7L2Z9 268 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 RASAL3Q86YV0 1011 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 TRIM48Q8IWZ4 208 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 FAM178BQ8IXR5 827 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-240ENST00000556339 MBD6Q96DN6 1003 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 ZNF747Q9BV97 191 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 DEFB129Q9H1M3 183 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 SEMA4AQ9H3S1 761 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 CD248Q9HCU0 757 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 HS3ST3A1Q9Y663 406 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 MRVI1Q9Y6F6 885 aa4.82□□□□□ -1.64
ATXN3-240ENST00000556339 MANSC4A6NHS7 340 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-240ENST00000556339 TCP10L2B9ZVM9 353 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SMAD7O15105 426 aaKnown RBP4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SUSD5O60279 629 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 ZNF623O75123 536 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 WDHD1O75717 1129 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-240ENST00000556339 LRG1P02750 347 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SLPIP03973 132 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SCG5P05408 212 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 KLRK1P26718 216 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 GYG1P46976 350 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 TM4SF4P48230 202 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 INHBEP58166 350 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 CYP4F3Q08477 520 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 TNFAIP1Q13829 316 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 UBE4AQ14139 1066 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SF1Q15637 639 aaKnown RBP4.81□□□□□ -1.64
ATXN3-240ENST00000556339 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 METTL24Q5JXM2 366 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SPDYAQ5MJ70 313 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 PKN3Q6P5Z2 889 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 Q8N1X5 172 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 PRMT6Q96LA8 375 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-240ENST00000556339 PTPN18Q99952 460 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 MENTQ9BUN1 341 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 ACBD3Q9H3P7 528 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 SMOC1Q9H4F8 434 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 TDRD3Q9H7E2 651 aaKnown RBP4.81□□□□□ -1.64
ATXN3-240ENST00000556339 CAPN10Q9HC96 672 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 TMOD2Q9NZR1 351 aa4.81□□□□□ -1.64
ATXN3-240ENST00000556339 ZNF521Q96K83 1311 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 DUOX1Q9NRD9 1551 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 B2RBV5 119 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 TADA3O75528 432 aa4.8□□□□□ -1.64
ATXN3-240ENST00000556339 IFIT1P09914 478 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms