RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TINF2Q9BSI4 451 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 POLR3CQ9BUI4 534 aaPredicted RBP7.53□□□□□ -1.2
SLIRP-204ENST00000555890 WDR11Q9BZH6 1224 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 HSD3B7Q9H2F3 369 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 CERS4Q9HA82 394 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 NRBP1Q9UHY1 535 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 DNM3Q9UQ16 869 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 GDAQ9Y2T3 454 aa7.53□□□□□ -1.2
SLIRP-204ENST00000555890 EPOPA6NHQ4 379 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 MYMKA6NI61 221 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 MEIS1O00470 390 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 ZBTB39O15060 712 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 GAS7O60861 476 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 LILRA1O75019 489 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 KIF20AO95235 890 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 TPM2P07951 284 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 PLA2G4BP0C869 781 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 IDEP14735 1019 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 TAL1P17542 331 aaPredicted RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 MUTP22033 750 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 RPA1P27694 616 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 GNA15P30679 374 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 GRM5P41594 1212 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 PRCPP42785 496 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 RABGGTBP53611 331 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 SKOR1P84550 965 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 GJC2Q5T442 439 aaPredicted RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 LRCH2Q5VUJ6 765 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 CDKAL1Q5VV42 579 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 XRRA1Q6P2D8 792 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 PSRC1Q6PGN9 363 aaPredicted RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 RNF207Q6ZRF8 634 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 CATSPERGQ6ZRH7 1159 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 CATSPER3Q86XQ3 398 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 VSTM4Q8IW00 320 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 FAM114A1Q8IWE2 563 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 LRRC8AQ8IWT6 810 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 CCDC65Q8IXS2 484 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 EHBP1Q8NDI1 1231 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 CLEC4DQ8WXI8 215 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 P2RX5Q93086 422 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 GJA10Q969M2 543 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 LENG9Q96B70 501 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 ATG4CQ96DT6 458 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 MED15Q96RN5 788 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 RIT2Q99578 217 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 MXRA8Q9BRK3 442 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 ZNF577Q9BSK1 485 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 TEKT3Q9BXF9 490 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 PORCNQ9H237 461 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 TUFT1Q9NNX1 390 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 SAMSN1Q9NSI8 373 aaKnown RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 RNF19AQ9NV58 838 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
SLIRP-204ENST00000555890 ADAMTS5Q9UNA0 930 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 RAI2Q9Y5P3 530 aa7.52□□□□□ -1.21
SLIRP-204ENST00000555890 KCNJ18B7U540 433 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 E9PMD0 336 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 H3BQ06 376 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 NFIBO00712 420 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 ATP2A1O14983 1001 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 MED24O75448 989 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 MYOGP15173 224 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 SFPQP23246 707 aaKnown RBP eCLIP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 CCNE1P24864 410 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 EEF1GP26641 437 aaKnown RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 STAT3P40763 770 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 SPIRE1Q08AE8 756 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 PPP2R5CQ13362 524 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 KCNJ12Q14500 433 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 NOLC1Q14978 699 aaKnown RBP eCLIP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 NR1I3Q14994 352 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 EPHA7Q15375 998 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 CCDC144BQ3MJ40 725 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 SNRNP48Q6IEG0 339 aaKnown RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 NSMFQ6X4W1 530 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 ZNF365Q70YC5 407 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 DPH6Q7L8W6 267 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 DYMQ7RTS9 669 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 GPBP1Q86WP2 473 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 CCDC116Q8IYX3 515 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 CCDC112Q8NEF3 446 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 KIAA1524Q8TCG1 905 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 LRRC15Q8TF66 581 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 CACTINQ8WUQ7 758 aaKnown RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 ARNTL2Q8WYA1 636 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 NAP1L5Q96NT1 182 aaPredicted RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 TSG101Q99816 390 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 EIF2AK1Q9BQI3 630 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms