RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MDM2Q00987 491 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MYL7Q01449 175 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SCRN3Q0VDG4 424 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ART3Q13508 389 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 BTNL9Q6UXG8 535 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RRM2BQ7LG56 351 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 LUZP2Q86TE4 346 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MMP19Q99542 508 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SH3BP1Q9Y3L3 701 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FGD6Q6ZV73 1430 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 C5orf58C9J3I9 102 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PSIP1O75475 530 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 EPN2O95208 641 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MT-CO1P00395 513 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ENO2P09104 434 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 AP1ARQ63HQ0 302 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 IYDQ6PHW0 289 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ESYT1Q9BSJ8 1104 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RUBCNLQ9H714 662 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SP110Q9HB58 689 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CHCHD3Q9NX63 227 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SLC5A4Q9NY91 659 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KIAA1024Q9UPX6 916 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SEC13P55735 322 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 GMFBP60983 142 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MC1RQ01726 317 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ACAP2Q15057 778 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ARMC4Q5T2S8 1044 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FGD2Q7Z6J4 655 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TCP11Q8WWU5 503 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TBATAQ96M53 351 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 UBE2OQ9C0C9 1292 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ABCC5O15440 1437 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PNMA6EA0A0J9YXQ4 647 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MYOCOSA0A1B0GUC4 107 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ATP9BO43861 1147 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF202O95125 648 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CASP9P55211 416 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MLLT1Q03111 559 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RPS6KA1Q15418 735 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TMX3Q96JJ7 454 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PCDHB9Q9Y5E1 797 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 DHX29Q7Z478 1369 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CYTH3O43739 400 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ITGAXP20702 1163 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RPL13P26373 211 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PSMC6P62333 389 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 C6orf10Q5SRN2 563 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PDXDC2PQ6P474 469 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM69Q86WT6 500 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 URGCPQ8TCY9 931 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ATG10Q9H0Y0 220 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CNNM2Q9H8M5 875 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 NRBP2Q9NSY0 501 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 COPG1Q9Y678 874 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 H3BSH0 61 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ASAP2O43150 1006 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MBL2P11226 248 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CCNYL2Q5T2Q4 361 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KIFC3Q9BVG8 833 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CIPCQ9C0C6 399 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TINAGL1Q9GZM7 467 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CYP4F11Q9HBI6 524 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CCNT2O60583 730 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 NFIAQ12857 509 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FUT11Q495W5 492 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CHERPQ8IWX8 916 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KIAA2013Q8IYS2 634 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 DEPDC7Q96QD5 511 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ABI2Q9NYB9 513 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 AURKCQ9UQB9 309 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FAM47E-STBD1D6RA91 191 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ATP5DP30049 168 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SKIV2L2P42285 1042 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MTA1Q13330 715 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KCTD6Q8NC69 237 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PURBQ96QR8 312 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RMDN3Q96TC7 470 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SAYSD1Q9NPB0 183 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ACSS2Q9NR19 701 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 STX18Q9P2W9 335 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RRP15Q9Y3B9 282 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FFAR2O15552 330 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ACTN4O43707 911 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TUBB4AP04350 444 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MSL3P1P0C860 447 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PCNX4Q63HM2 1172 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 OLFML2AQ68BL7 652 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PLA2G4FQ68DD2 849 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PTF1AQ7RTS3 328 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 DIS3LQ8TF46 1054 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ZDHHC5Q9C0B5 715 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 AS3MTQ9HBK9 375 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ZDHHC4Q9NPG8 344 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KMT5AQ9NQR1 393 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SIK3Q9Y2K2 1263 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PIK3R4Q99570 1358 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ATMINO43313 823 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TTLL1O95922 423 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ASXL2Q76L83 1435 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms