RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TARS2Q9BW92 718 aaKnown RBP11.66□□□□□ -0.54
PTCH1-225ENST00000551845 MRPL9Q9BYD2 267 aaKnown RBP11.66□□□□□ -0.54
PTCH1-225ENST00000551845 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 MRPL44Q9H9J2 332 aaKnown RBP11.66□□□□□ -0.54
PTCH1-225ENST00000551845 RSAD1Q9HA92 442 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 RC3H2Q9HBD1 1191 aaKnown RBP11.66□□□□□ -0.54
PTCH1-225ENST00000551845 PARP2Q9UGN5 583 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 SERTAD1Q9UHV2 236 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 USP20Q9Y2K6 914 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 GIT1Q9Y2X7 761 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 PCDHB13Q9Y5F0 798 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 EPOPA6NHQ4 379 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 K7ENM7 598 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 ATF7P17544 494 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-225ENST00000551845 NMT1P30419 496 aaKnown RBP11.65□□□□□ -0.54
PTCH1-225ENST00000551845 NDUFA8P51970 172 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 GTF2BQ00403 316 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 DCAF4L1Q3SXM0 396 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 CLLU1OSQ5K130 101 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 ZPBP2Q6X784 338 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 AGMOQ6ZNB7 445 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 FSIP1Q8NA03 581 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 FBXO22Q8NEZ5 403 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 URGCPQ8TCY9 931 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
PTCH1-225ENST00000551845 CLP1Q92989 425 aaKnown RBP11.65□□□□□ -0.54
PTCH1-225ENST00000551845 BICD1Q96G01 975 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 APOL6Q9BWW8 343 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 ST6GALNAC4Q9H4F1 302 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 RNF19AQ9NV58 838 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 HES2Q9Y543 173 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 PCDHB12Q9Y5F1 795 aa11.65□□□□□ -0.54
PTCH1-225ENST00000551845 MRPL42Q9Y6G3 142 aaKnown RBP11.65□□□□□ -0.54
PTCH1-225ENST00000551845 CHD9Q3L8U1 2897 aa11.65□□□□□ -0.55
PTCH1-225ENST00000551845 TANC1Q9C0D5 1861 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-225ENST00000551845 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 CARNS1A5YM72 827 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 MEIS3P2A8K0S8 358 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 PRR33A8MZF0 331 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 C5orf67F2Z3F1 127 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 H3BNC9 293 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 CLDN3O15551 220 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 TOM1L1O75674 476 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 ZNF202O95125 648 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 ALDH2P05091 517 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 AKAP5P24588 427 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 CTNNB1P35222 781 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 MATR3P43243 847 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCH1-225ENST00000551845 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
PTCH1-225ENST00000551845 ASIC1P78348 528 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 RNASELQ05823 741 aaKnown RBP11.64□□□□□ -0.55
PTCH1-225ENST00000551845 GPM6BQ13491 265 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 EEF1DP3Q658K8 133 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 LRRC55Q6ZSA7 311 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 STXBP4Q6ZWJ1 553 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 SFR1Q86XK3 245 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 LRRC43Q8N309 656 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 FAM193BQ96PV7 902 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-225ENST00000551845 FIZ1Q96SL8 496 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 GAD1Q99259 594 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 PTPRHQ9HD43 1115 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 OLFML3Q9NRN5 406 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 SNTG2Q9NY99 539 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 TBC1D7Q9P0N9 293 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 EXOC7Q9UPT5 735 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
PTCH1-225ENST00000551845 PRRC2BQ5JSZ5 2229 aaKnown RBP11.64□□□□□ -0.55
PTCH1-225ENST00000551845 FRMD3A2A2Y4 597 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
PTCH1-225ENST00000551845 GCNT3O95395 438 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 EDN1P05305 212 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 MYL1P05976 194 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 MCF2P10911 925 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 LAG3P18627 525 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 LIG4P49917 911 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 YARSP54577 528 aaKnown RBP11.63□□□□□ -0.55
PTCH1-225ENST00000551845 ALCAMQ13740 583 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 PTPROQ16827 1216 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 ZNF568Q3ZCX4 644 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 ZC2HC1CQ53FD0 456 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-225ENST00000551845 SLFN12LQ6IEE8 588 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 MPZL3Q6UWV2 235 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 UNC13DQ70J99 1090 aa11.63□□□□□ -0.55
PTCH1-225ENST00000551845 SPRED2Q7Z698 418 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms