RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 IGF2RP11717 2491 aa7.53□□□□□ -1.2
RNF41-204ENST00000548120 TTC3P53804 2025 aa7.52□□□□□ -1.2
RNF41-204ENST00000548120 COL4A3Q01955 1670 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 KANSL1LA0AUZ9 987 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 NT5C1B-RDH14C9J2C7 533 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 M0R2N6 131 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 TAF4O00268 1085 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 CXCL14O95715 111 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 BMP15O95972 392 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 RETP07949 1114 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 PARP1P09874 1014 aaKnown RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 TGFB3P10600 412 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 ATP2B1P20020 1258 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 SPINK2P20155 84 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 CCND2P30279 289 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 HOXA13P31271 388 aaPredicted RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 TRAPPC10P48553 1259 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 ZNF75DP51815 510 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 NLRP12P59046 1061 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 NLRP5P59047 1200 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 BMS1Q14692 1282 aaKnown RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 QRICH1Q2TAL8 776 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 AASDHQ4L235 1098 aaPredicted RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 MARCH8Q5T0T0 291 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 LRRC55Q6ZSA7 311 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 VSIG10LQ86VR7 867 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 PLA2G4DQ86XP0 818 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 ELOA2Q8IYF1 753 aaPredicted RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 CEP57L1Q8IYX8 460 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 BLIDQ8IZY5 108 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 FAM177A1Q8N128 213 aaPredicted RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 SLC39A11Q8N1S5 342 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 ZCCHC14Q8WYQ9 949 aaKnown RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 SHDQ96IW2 340 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 BPIFA3Q9BQP9 254 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 C1orf112Q9NSG2 853 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 RYDENQ9NUL5 291 aaKnown RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 FAM13BQ9NYF5 915 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 PCDHA4Q9UN74 947 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 MRPL11Q9Y3B7 192 aaKnown RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 MTF2Q9Y483 593 aaPredicted RBP7.52□□□□□ -1.21
RNF41-204ENST00000548120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.52□□□□□ -1.21
RNF41-204ENST00000548120 SQORQ9Y6N5 450 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 CLUHO75153 1309 aa7.52□□□□□ -1.21
RNF41-204ENST00000548120 MBLAC1A4D2B0 266 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 FAM170BA6NMN3 283 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 C9IYK1 514 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 BHMG1C9JSJ3 638 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 KLRF2D3W0D1 207 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 ACTN4O43707 911 aaKnown RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 LRP3O75074 770 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 PTMAP06454 111 aaKnown RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 SNHG28P0DPA3 235 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 CD72P21854 359 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 SMARCA1P28370 1054 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 TCF7P36402 384 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 HSD17B4P51659 736 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 STARD6P59095 220 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 ATP2C1P98194 919 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 FOXC1Q12948 553 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 PNOCQ13519 176 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 NEDD9Q14511 834 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 ZNF174Q15697 407 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 CSRP2Q16527 193 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 DPCR1Q3MIW9 517 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 LONRF3Q496Y0 759 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 ASPRV1Q53RT3 343 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 GALNT17Q6IS24 598 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 SARM1Q6SZW1 724 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 PIK3AP1Q6ZUJ8 805 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 SLC24A5Q71RS6 500 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 GET4Q7L5D6 327 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 ABI1Q8IZP0 508 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 VPS52Q8N1B4 723 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 AOPEPQ8N6M6 819 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 SLC22A17Q8WUG5 538 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 BBXQ8WY36 941 aaPredicted RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 STAMQ92783 540 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 NELL1Q92832 810 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 TMEM169Q96HH4 297 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 CASD1Q96PB1 797 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 MYADMQ96S97 322 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 CELF4Q9BZC1 486 aaKnown RBP7.51□□□□□ -1.21
RNF41-204ENST00000548120 MAF1Q9H063 256 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 ZBP1Q9H171 429 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 CSRNP2Q9H175 543 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 RGS18Q9NS28 235 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 TMEM161AQ9NX61 479 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 BARHL2Q9NY43 387 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 EPS15L1Q9UBC2 864 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 PCDHA6Q9UN73 950 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 PCDHA8Q9Y5H6 950 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 NUMBLQ9Y6R0 609 aa7.51□□□□□ -1.21
RNF41-204ENST00000548120 DENND4AQ7Z401 1863 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms