RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MRPL17Q9NRX2 175 aaKnown RBP11.31□□□□□ -0.6
NPIPB4-217ENST00000543449 DZANK1Q9NVP4 752 aa11.31□□□□□ -0.6
NPIPB4-217ENST00000543449 ARHGAP28Q9P2N2 729 aa11.31□□□□□ -0.6
NPIPB4-217ENST00000543449 STK17AQ9UEE5 414 aa11.31□□□□□ -0.6
NPIPB4-217ENST00000543449 CHD9Q3L8U1 2897 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 MEIS3P2A8K0S8 358 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 NT5C1B-RDH14C9J2C7 533 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 NRP1O14786 923 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 MBTPS2O43462 519 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 TBX10O75333 385 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 SOD2P04179 222 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 URODP06132 367 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 THP07101 528 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 LIG1P18858 919 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 CA8P35219 290 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 PBX3P40426 434 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 OR1G1P47890 313 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 SCNN1GP51170 649 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 ELAVL2Q12926 359 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 RESTQ13127 1097 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 TUSC3Q13454 348 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 KYAT1Q16773 422 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 ZNF280BQ86YH2 543 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 GJD3Q8N144 294 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 MSLNLQ96KJ4 702 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 RUSC1Q9BVN2 902 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 HERC2P3Q9BVR0 1158 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 C1QTNF1Q9BXJ1 281 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 DNAJB4Q9UDY4 337 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 HES2Q9Y543 173 aa11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 LAMA2P24043 3122 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-217ENST00000543449 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 TBCAO75347 108 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 DDHD2O94830 711 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 KRT18P05783 430 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 MCF2P10911 925 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 ALADP13716 330 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 IL9P15248 144 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 AKAP5P24588 427 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 GTF2F1P35269 517 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 ITIH3Q06033 890 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 ATL3Q6DD88 541 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 CES5AQ6NT32 575 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 ANKRD54Q6NXT1 300 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 LARP4BQ92615 738 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 RAD54LQ92698 747 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 UROC1Q96N76 676 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 SLC38A7Q9NVC3 462 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 CLEC1BQ9P126 229 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
NPIPB4-217ENST00000543449 COL6A3P12111 3177 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 PLXNA4Q9HCM2 1894 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 PER2O15055 1255 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 LINC01565O15544 149 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 TOM1L1O75674 476 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 RECQL4O94761 1208 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 FAM13AO94988 1023 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 BRD1O95696 1058 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 ADH1AP07327 375 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 DDIT3P35638 169 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 GRM5P41594 1212 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 GLUD2P49448 558 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 MAPK7Q13164 816 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 KCNC3Q14003 757 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 PTPAQ15257 358 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 ZNF568Q3ZCX4 644 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 CCDC73Q6ZRK6 1079 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 DAW1Q8N136 415 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 TSPAN18Q96SJ8 248 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 TCHPQ9BT92 498 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 SNTG2Q9NY99 539 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 ADAM28Q9UKQ2 775 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 BARX2Q9UMQ3 279 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 SF3B1O75533 1304 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPIPB4-217ENST00000543449 CDH23Q9H251 3354 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms