RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 PCMTD2Q9NV79 361 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 CHCHD3Q9NX63 227 aaKnown RBP10.4□□□□□ -0.74
TCF4-208ENST00000543082 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
TCF4-208ENST00000543082 LNPEPQ9UIQ6 1025 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 PHTF1Q9UMS5 762 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 PTPN22Q9Y2R2 807 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 FAM47DPA6NHR8 397 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 CREB3O43889 395 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 ATP9AO75110 1047 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 ENTPD5O75356 428 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 AKAP3O75969 853 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 NR3C1P04150 777 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 T-ENOLP0DO92 83 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 ITIH2P19823 946 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 RANBP1P43487 201 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 CACNA2D1P54289 1103 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 CAV1Q03135 178 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 SLC4A8Q2Y0W8 1093 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 ZNF449Q6P9G9 518 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 RHBDF2Q6PJF5 856 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 EPM2AIP1Q7L775 607 aaPredicted RBP10.4□□□□□ -0.74
TCF4-208ENST00000543082 SLC13A5Q86YT5 568 aaPredicted RBP10.4□□□□□ -0.74
TCF4-208ENST00000543082 KRT35Q92764 455 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 DYNLL2Q96FJ2 89 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 FAM84BQ96KN1 310 aaPredicted RBP10.4□□□□□ -0.74
TCF4-208ENST00000543082 GBP5Q96PP8 586 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 CCDC77Q9BR77 488 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 CCDC28BQ9BUN5 200 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 VCX3BQ9H321 246 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 VCX3AQ9NNX9 186 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 SAR1AQ9NR31 198 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
TCF4-208ENST00000543082 ABCA3Q99758 1704 aa10.4□□□□□ -0.75
TCF4-208ENST00000543082 FRMPD4Q14CM0 1322 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 THAP12O43422 761 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 EDIL3O43854 480 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 TJP3O95049 919 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 NR1H3Q13133 447 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 DRAP1Q14919 205 aaPredicted RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 GSTA3Q16772 222 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 SNX30Q5VWJ9 437 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 FOXB2Q5VYV0 432 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 C4orf50Q6ZRC1 276 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 SYDE1Q6ZW31 735 aaPredicted RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 ZC3H18Q86VM9 953 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 ZDHHC14Q8IZN3 488 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 KLHL23Q8NBE8 558 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 PPFIBP2Q8ND30 876 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 HAS1Q92839 578 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 SNF8Q96H20 258 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 NAP1L4Q99733 375 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 LARSQ9P2J5 1176 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 PCDHA12Q9UN75 941 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 TNNI2P48788 182 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 MARCKSL1P49006 195 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 CASP5P51878 434 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 SH3BGRP55822 239 aaPredicted RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 SESN3P58005 492 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 CDR2Q01850 454 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 KRT17Q04695 432 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 STAT4Q14765 748 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 KPNB1Q14974 876 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 BICDL1Q6ZP65 573 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 RNF207Q6ZRF8 634 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 C10orf82Q8WW14 230 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 PTPRN2Q92932 1015 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 DHX36Q9H2U1 1008 aaKnown RBP10.39□□□□□ -0.75
TCF4-208ENST00000543082 LRRC19Q9H756 370 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 ZNF287Q9HBT7 754 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 VAT1LQ9HCJ6 419 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 UBN1Q9NPG3 1134 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 ASIC3Q9UHC3 531 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 DNAJC12Q9UKB3 198 aa10.39□□□□□ -0.75
TCF4-208ENST00000543082 ASTN1O14525 1302 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 SPATA31A1Q5TZJ5 1347 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 A0A1W2PRG0 241 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 POTEB3A0JP26 581 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 TMEM110-MUSTN1A8MSY1 372 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 POTECB2RU33 542 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 EDF1O60869 148 aaKnown RBP10.38□□□□□ -0.75
TCF4-208ENST00000543082 ASMTLO95671 621 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 MUTP22033 750 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 MAN1A1P33908 653 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 CHKAP35790 457 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 SLC34A1Q06495 639 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 SPARCL1Q14515 664 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 KIF22Q14807 665 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 RCN1Q15293 331 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 SIX1Q15475 284 aaPredicted RBP10.38□□□□□ -0.75
TCF4-208ENST00000543082 BMT2Q1RMZ1 405 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 SLC45A4Q5BKX6 768 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 POTEBQ6S5H4 581 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 LRRC74BQ6ZQY2 392 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 FBXO33Q7Z6M2 555 aa10.38□□□□□ -0.75
TCF4-208ENST00000543082 CYP4X1Q8N118 509 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms