RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 APBA1Q02410 837 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 NOMO1Q15155 1222 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 PTPN21Q16825 1174 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 Q6ZVL8 140 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 APBB1IPQ7Z5R6 666 aaPredicted RBP5.34□□□□□ -1.55
MDM2-229ENST00000543046 GSPT2Q8IYD1 628 aaKnown RBP5.34□□□□□ -1.55
MDM2-229ENST00000543046 THEMISQ8N1K5 641 aaPredicted RBP5.34□□□□□ -1.55
MDM2-229ENST00000543046 PPM1NQ8N819 430 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 MB21D1Q8N884 522 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 MDGA1Q8NFP4 955 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 MDM1Q8TC05 714 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 SH3RF3Q8TEJ3 882 aaPredicted RBP5.34□□□□□ -1.55
MDM2-229ENST00000543046 DNM3Q9UQ16 869 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 GIT1Q9Y2X7 761 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
MDM2-229ENST00000543046 PCDHGA8Q9Y5G5 932 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 PCDHGA7Q9Y5G6 932 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 PCDHGA6Q9Y5G7 932 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 MRFAP1Q9Y605 127 aa5.34□□□□□ -1.55
MDM2-229ENST00000543046 ZMYM3Q14202 1370 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 ACRV1P26436 265 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 MGAT2Q10469 447 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 CRHR2Q13324 411 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 USP39Q53GS9 565 aaKnown RBP5.33□□□□□ -1.56
MDM2-229ENST00000543046 PRAMEF14Q5SWL7 426 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 Q6ZRM9 215 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 PDZD4Q76G19 769 aaPredicted RBP5.33□□□□□ -1.56
MDM2-229ENST00000543046 PNMA8AQ86V59 439 aaPredicted RBP5.33□□□□□ -1.56
MDM2-229ENST00000543046 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.33□□□□□ -1.56
MDM2-229ENST00000543046 OR7D4Q8NG98 312 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 ATXN2LQ8WWM7 1075 aaKnown RBP5.33□□□□□ -1.56
MDM2-229ENST00000543046 ST8SIA2Q92186 375 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 HOXB13Q92826 284 aaPredicted RBP5.33□□□□□ -1.56
MDM2-229ENST00000543046 CPPED1Q9BRF8 314 aaPredicted RBP5.33□□□□□ -1.56
MDM2-229ENST00000543046 BCO1Q9HAY6 547 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 TUBD1Q9UJT1 453 aa5.33□□□□□ -1.56
MDM2-229ENST00000543046 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 NDUFS2O75306 463 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 INSRRP14616 1297 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 C5AR1P21730 350 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 PTPN7P35236 360 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 SREBF1P36956 1147 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 PER3P56645 1201 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 EXOSC10Q01780 885 aaKnown RBP5.32□□□□□ -1.56
MDM2-229ENST00000543046 DOK3Q7L591 496 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 FAM83AQ86UY5 434 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 XYLT1Q86Y38 959 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 TRMT2AQ8IZ69 625 aaKnown RBP5.32□□□□□ -1.56
MDM2-229ENST00000543046 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 NRG4Q8WWG1 115 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 EXTL1Q92935 676 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 CEP95Q96GE4 821 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 TEKT5Q96M29 485 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 UHRF1Q96T88 793 aaPredicted RBP5.32□□□□□ -1.56
MDM2-229ENST00000543046 PDCD2LQ9BRP1 358 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 LSM14BQ9BX40 385 aaKnown RBP5.32□□□□□ -1.56
MDM2-229ENST00000543046 SLC13A1Q9BZW2 595 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 TYW1Q9NV66 732 aaKnown RBP5.32□□□□□ -1.56
MDM2-229ENST00000543046 MYRFQ9Y2G1 1151 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 SPEF1Q9Y4P9 236 aa5.32□□□□□ -1.56
MDM2-229ENST00000543046 FAM171A2A8MVW0 826 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 ENDOD1O94919 500 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 HK1P19367 917 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 CCND1P24385 295 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 MAN2A2P49641 1150 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 SCNN1GP51170 649 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 RABGGTBP53611 331 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 RRP1BQ14684 758 aaKnown RBP5.31□□□□□ -1.56
MDM2-229ENST00000543046 ODF1Q14990 250 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 SEPT2Q15019 361 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 ZXDCQ2QGD7 858 aaPredicted RBP5.31□□□□□ -1.56
MDM2-229ENST00000543046 NRN1LQ496H8 165 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 DCAF17Q5H9S7 520 aaPredicted RBP5.31□□□□□ -1.56
MDM2-229ENST00000543046 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 C1QL3Q5VWW1 255 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 C1orf210Q8IVY1 113 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 FBXO18Q8NFZ0 1043 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 OR2I1PQ8NGU4 316 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.31□□□□□ -1.56
MDM2-229ENST00000543046 STAG1Q8WVM7 1258 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 PGBD4Q96DM1 585 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 GPR87Q9BY21 358 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 CPEB1Q9BZB8 566 aaKnown RBP5.31□□□□□ -1.56
MDM2-229ENST00000543046 AURKAIP1Q9NWT8 199 aaPredicted RBP5.31□□□□□ -1.56
MDM2-229ENST00000543046 DDX56Q9NY93 547 aaKnown RBP5.31□□□□□ -1.56
MDM2-229ENST00000543046 HDAC5Q9UQL6 1122 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 SIK3Q9Y2K2 1263 aa5.31□□□□□ -1.56
MDM2-229ENST00000543046 KLRG2A4D1S0 409 aaPredicted RBP5.3□□□□□ -1.56
MDM2-229ENST00000543046 GOLGA6L6A8MZA4 724 aa5.3□□□□□ -1.56
MDM2-229ENST00000543046 B5MCH6 92 aa5.3□□□□□ -1.56
MDM2-229ENST00000543046 PLSCR1O15162 318 aa5.3□□□□□ -1.56
MDM2-229ENST00000543046 SLC6A9P48067 706 aa5.3□□□□□ -1.56
MDM2-229ENST00000543046 FLT3LGP49771 235 aa5.3□□□□□ -1.56
MDM2-229ENST00000543046 CNGB1Q14028 1251 aaPredicted RBP5.3□□□□□ -1.56
MDM2-229ENST00000543046 PUM1Q14671 1186 aaKnown RBP eCLIP5.3□□□□□ -1.56
MDM2-229ENST00000543046 EFCAB2Q5VUJ9 269 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms