RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 STK17AQ9UEE5 414 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 SLC12A4Q9UP95 1085 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 PPP2R2CQ9Y2T4 447 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 L3MBTL1Q9Y468 752 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 TIMM22Q9Y584 194 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 PCDHB5Q9Y5E4 795 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CASZ1Q86V15 1759 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 MYO3AQ8NEV4 1616 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 SETD1BQ9UPS6 1966 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 MROH7Q68CQ1 1323 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 C3P01024 1663 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ABCC12Q96J65 1359 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 FER1L4A9Z1Z3 1794 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 FAM221AA4D161 298 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 GMNCA6NCL1 334 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 AKR1B15C9JRZ8 316 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 GCOM1H8Y6P7 765 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CETN3O15182 167 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 NVLO15381 856 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 ASAP2O43150 1006 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SULT1B1O43704 296 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 KPNA6O60684 536 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 HSF2BPO75031 334 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CILPO75339 1184 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 ZNF202O95125 648 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 KRT14P02533 472 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 APOEP02649 317 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CHGBP05060 677 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 ITGA2BP08514 1039 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 UBL4AP11441 157 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 AMPD1P23109 780 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 IL32P24001 234 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 HMOX2P30519 316 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 HSPA1LP34931 641 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SERPINB6P35237 376 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 PCK1P35558 622 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 MDH1P40925 334 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 THOP1P52888 689 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 RPL26P61254 145 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 VSNL1P62760 191 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 HPCAP84074 193 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 RPL6Q02878 288 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 TMEM62Q0P6H9 643 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 DCTN2Q13561 401 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 NFE2L1Q14494 772 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 POU4F3Q15319 338 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 INSCQ1MX18 579 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 RABL6Q3YEC7 729 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 TTC22Q5TAA0 569 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 RASIP1Q5U651 963 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SYDE2Q5VT97 1194 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 DENND2CQ68D51 928 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SPECC1LQ69YQ0 1117 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 ANO7Q6IWH7 933 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 HIBCHQ6NVY1 386 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 TMEM154Q6P9G4 183 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SLC2A7Q6PXP3 512 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CYP26C1Q6V0L0 522 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 BNC2Q6ZN30 1099 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 RUFY3Q7L099 469 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 TAOK1Q7L7X3 1001 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 DDX42Q86XP3 938 aaKnown RBP eCLIP4.66□□□□□ -1.667e-6■■■□□ 16.5
SNHG1-219ENST00000542112 MAP7D3Q8IWC1 876 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.66□□□□□ -1.663e-7■■■■■ 27.9
SNHG1-219ENST00000542112 REXO1Q8N1G1 1221 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 MREGQ8N565 214 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 DTWD1Q8N5C7 304 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 BBOF1Q8ND07 529 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 LINS1Q8NG48 757 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 BRSK1Q8TDC3 778 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 STK35Q8TDR2 534 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 ATRIPQ8WXE1 791 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CAVIN3Q969G5 261 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CYFIP2Q96F07 1278 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 PANX2Q96RD6 677 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SLF1Q9BQI6 1058 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SIKE1Q9BRV8 207 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 HERC2P3Q9BVR0 1158 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SPATA16Q9BXB7 569 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 AGXT2Q9BYV1 514 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 LRRC27Q9C0I9 530 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 TPK1Q9H3S4 243 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CNOT10Q9H9A5 744 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SLC38A10Q9HBR0 1119 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 SEPT11Q9NVA2 429 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 PTTG2Q9NZH5 202 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 THEGQ9P2T0 379 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 LIMCH1Q9UPQ0 1083 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 PCDHB4Q9Y5E5 795 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CD2APQ9Y5K6 639 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 MED14O60244 1454 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 MYOM1P52179 1685 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 TTC21AQ8NDW8 1320 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 NEXMIFQ5QGS0 1516 aa4.66□□□□□ -1.66
SNHG1-219ENST00000542112 ARHGEF28Q8N1W1 1705 aaKnown RBP4.66□□□□□ -1.66
SNHG1-219ENST00000542112 CEMIPQ8WUJ3 1361 aa4.65□□□□□ -1.66
SNHG1-219ENST00000542112 BCL9O00512 1426 aa4.65□□□□□ -1.66
SNHG1-219ENST00000542112 A0A088AWK7 358 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms