RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 NT5C3AQ9H0P0 336 aa10.39□□□□□ -0.75
CLDN2-202ENST00000540876 CHKBQ9Y259 395 aa10.39□□□□□ -0.75
CLDN2-202ENST00000540876 FOXO6A8MYZ6 492 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 SOCS7O14512 581 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 PSMA7O14818 248 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 PPEF1O14829 653 aaPredicted RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 PRPF3O43395 683 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 ADCY3O60266 1144 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 RNASEH1O60930 286 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 STK10O94804 968 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 COL6A2P12110 1019 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 HOXA10P31260 410 aaPredicted RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 CDR2Q01850 454 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 B3GNT6Q6ZMB0 384 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 DIS3LQ8TF46 1054 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 GAB3Q8WWW8 586 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 CASP10Q92851 521 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 ATP6V0A1Q93050 837 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 STK33Q9BYT3 514 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 MYO5AQ9Y4I1 1855 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 T-ENOLP0DO92 83 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 GRIA2P42262 883 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 SERPINB8P50452 374 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 USP11P51784 963 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 EMP3P54852 163 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 KIF22Q14807 665 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 NAB2Q15742 525 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 KSR1Q8IVT5 923 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 WDR75Q8IWA0 830 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 CKAP2Q8WWK9 683 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 EIF2AQ9BY44 585 aaKnown RBP10.38□□□□□ -0.75
CLDN2-202ENST00000540876 DRC3Q9H069 523 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 SEMA4AQ9H3S1 761 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 TCP11L1Q9NUJ3 509 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 FAIMQ9NVQ4 179 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 ZNF532Q9HCE3 1301 aa10.38□□□□□ -0.75
CLDN2-202ENST00000540876 NKRFO15226 690 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 MAPK13O15264 365 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 PGM3O95394 542 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FGFR4P22455 802 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 HNRNPH3P31942 346 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 TMED10P49755 219 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 AUHQ13825 339 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ZNF174Q15697 407 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 NTRK3Q16288 839 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 RBM44Q6ZP01 1051 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 DGCR14Q96DF8 476 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 TXLNGYQ9BZA5 131 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FOXP1Q9H334 677 aaPredicted RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 PIH1D3Q9NQM4 214 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FAF1Q9UNN5 650 aaPredicted RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 DOLKQ9UPQ8 538 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 SMIM31A0A1B0GVY4 71 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FOXP2O15409 715 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 RXRGP48443 463 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ARPC4P59998 168 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 DSG1Q02413 1049 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 MTFR1Q15390 333 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 POTEEQ6S8J3 1075 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 TMCO5AQ8N6Q1 288 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FNDC8Q8TC99 324 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 SREK1Q8WXA9 508 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 IRGQQ8WZA9 623 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 WASF1Q92558 559 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 EURLQ9NYK6 297 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 HESX1Q9UBX0 185 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 PPP1R9AQ9ULJ8 1098 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 SNX24Q9Y343 169 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 CCDC188H7C350 402 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 BIRC5O15392 142 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 SERPINB7O75635 380 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 PTPN4P29074 926 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 LMNB2Q03252 620 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ARID5AQ03989 594 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FIGNQ5HY92 759 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ARHGAP27Q6ZUM4 889 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 CYB5R4Q7L1T6 521 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ADAT2Q7Z6V5 191 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 USP33Q8TEY7 942 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ESR2Q92731 530 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 MAML3Q96JK9 1138 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 FNBP1Q96RU3 617 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 HNRNPABQ99729 332 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 ZKSCAN3Q9BRR0 538 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 PACSIN1Q9BY11 444 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 SYNCQ9H7C4 482 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 METTL14Q9HCE5 456 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 STX18Q9P2W9 335 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms