RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CTTNQ14247 550 aaKnown RBP13.88□□□□□ -0.19
COPS7A-211ENST00000540408 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 RSAD2Q8WXG1 361 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 HAS1Q92839 578 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 NT5C3AQ9H0P0 336 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 BRMS1Q9HCU9 246 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 FNIP2Q9P278 1114 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 CA14Q9ULX7 337 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 HES2Q9Y543 173 aa13.88□□□□□ -0.19
COPS7A-211ENST00000540408 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
COPS7A-211ENST00000540408 DENND4AQ7Z401 1863 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 TGM5O43548 720 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 N4BP1O75113 896 aaKnown RBP13.87□□□□□ -0.19
COPS7A-211ENST00000540408 SLITRK3O94933 977 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 FUT10Q6P4F1 479 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-211ENST00000540408 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-211ENST00000540408 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-211ENST00000540408 WASF1Q92558 559 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 MYADMQ96S97 322 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 PRKD2Q9BZL6 878 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 MIOSQ9NXC5 875 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 PARP2Q9UGN5 583 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 ADAM28Q9UKQ2 775 aa13.87□□□□□ -0.19
COPS7A-211ENST00000540408 ZFP37Q9Y6Q3 630 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-211ENST00000540408 KRBA1A5PL33 1030 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 ZBTB39O15060 712 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
COPS7A-211ENST00000540408 LAMP2P13473 410 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 ARF4P18085 180 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-211ENST00000540408 AKAP5P24588 427 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 GRIK3Q13003 919 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 PHLDB3Q6NSJ2 640 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 SLC27A1Q6PCB7 646 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
COPS7A-211ENST00000540408 GET4Q7L5D6 327 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-211ENST00000540408 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 SHDQ96IW2 340 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 EIF2AK1Q9BQI3 630 aaKnown RBP13.86□□□□□ -0.19
COPS7A-211ENST00000540408 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 TBC1D17Q9HA65 648 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 SIT1Q9Y3P8 196 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 CFAP54Q96N23 3096 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 STK36Q9NRP7 1315 aa13.86□□□□□ -0.19
COPS7A-211ENST00000540408 LYPLA2O95372 231 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 EFEMP2O95967 443 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 KRT2P35908 639 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 MBTD1Q05BQ5 628 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 SCRN1Q12765 414 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 SPECC1Q5M775 1068 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 OXER1Q8TDS5 423 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 GPR152Q8TDT2 470 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-211ENST00000540408 B3GALT6Q96L58 329 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 NXF3Q9H4D5 531 aaKnown RBP13.85□□□□□ -0.19
COPS7A-211ENST00000540408 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 ARHGEF3Q9NR81 526 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 C2orf16Q68DN1 1984 aa13.85□□□□□ -0.19
COPS7A-211ENST00000540408 SF3B1O75533 1304 aaKnown RBP eCLIP13.85□□□□□ -0.19
COPS7A-211ENST00000540408 A0A1B0GUA9 196 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 ZMYND10O75800 440 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 PAPLNO95428 1278 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 NPTXRO95502 500 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
COPS7A-211ENST00000540408 FSHRP23945 695 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 ARL2P36404 184 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 SPIRE1Q08AE8 756 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 CAPSQ13938 189 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
COPS7A-211ENST00000540408 CALCRLQ16602 461 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 TMEM132AQ24JP5 1023 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 LIN9Q5TKA1 542 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 LILRA6Q6PI73 481 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 DCLRE1AQ6PJP8 1040 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 ASAP3Q8TDY4 903 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 HSD17B14Q9BPX1 270 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
COPS7A-211ENST00000540408 KLK14Q9P0G3 267 aa13.84□□□□□ -0.19
COPS7A-211ENST00000540408 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.19
COPS7A-211ENST00000540408 MYO15AQ9UKN7 3530 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 ANHXE9PGG2 379 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 F8W810 466 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 DCNP07585 359 aaKnown RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 RPL17P18621 184 aaKnown RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 GLRA2P23416 452 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 RARRES1P49788 294 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 TUSC3Q13454 348 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 AMHR2Q16671 573 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms