RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 YBX2Q9Y2T7 364 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ABLIM1O14639 778 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CLDN3O15551 220 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SMC2O95347 1197 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PROZP22891 400 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ABCD1P33897 745 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 OSTNP61366 133 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PSMD2Q13200 908 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ALCAMQ13740 583 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 KCNB1Q14721 858 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SEZ6Q53EL9 994 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MPZL3Q6UWV2 235 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 AGMOQ6ZNB7 445 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MRPL10Q7Z7H8 261 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CEP120Q8N960 986 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZNF507Q8TCN5 953 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RAD9AQ99638 391 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 INSL6Q9Y581 213 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PIGRP01833 764 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ITGA4P13612 1032 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CLLU1OSQ5K130 101 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TMEM192Q8IY95 271 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 THNSL1Q8IYQ7 743 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SMYD4Q8IYR2 804 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HELQQ8TDG4 1101 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZNF689Q96CS4 500 aaPredicted RBP13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PGBD4Q96DM1 585 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 GSDMAQ96QA5 445 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 BIN1O00499 593 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 EIF3DO15371 548 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ARHGEF15O94989 841 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CA3P07451 260 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 DNAJB2P25686 324 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SMAD3P84022 425 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 DCAF4L1Q3SXM0 396 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TMEM206Q9H813 350 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MSRAQ9UJ68 235 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 INPP5FQ9Y2H2 1132 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MCF2P10911 925 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ADSSP30520 456 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MCL1Q07820 350 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 BTG3Q14201 252 aaPredicted RBP13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CASD1Q96PB1 797 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MSTO1Q9BUK6 570 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CXCL16Q9H2A7 254 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RSAD1Q9HA92 442 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RC3H2Q9HBD1 1191 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HCSTQ9UBK5 93 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MAN1B1Q9UKM7 699 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZMYM2Q9UBW7 1377 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 A0A0B4J269 797 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TGFB1I1O43294 461 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 OFD1O75665 1012 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RECQL4O94761 1208 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MLH1P40692 756 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RAB30Q15771 203 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 POMGNT1Q8WZA1 660 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 GAD1Q99259 594 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 KIAA1468Q9P260 1216 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ARL5CA6NH57 179 aa13.02□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CLIC2O15247 247 aa13.02□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HOXA2O43364 376 aa13.02□□□□□ -0.32
TRAF3IP2-212ENST00000532708 POMCP01189 267 aa13.02□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TNFSF9P41273 254 aa13.02□□□□□ -0.32
TRAF3IP2-212ENST00000532708 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.32
TRAF3IP2-212ENST00000532708 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms