RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 TDGF1P13385 188 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 CD72P21854 359 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 GNA11P29992 359 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 ARHGAP8P85298 464 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 MLF2Q15773 248 aaPredicted RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 NTRK3Q16288 839 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 POTEHQ6S545 545 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 GRASPQ7Z6J2 395 aaPredicted RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 PHKBQ93100 1093 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 BCO2Q9BYV7 579 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 DHX33Q9H6R0 707 aaKnown RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 PIDD1Q9HB75 910 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 LTB4R2Q9NPC1 389 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 UBN1Q9NPG3 1134 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 ZSCAN32Q9NX65 697 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 WRAP73Q9P2S5 460 aaPredicted RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 SMG5Q9UPR3 1016 aaKnown RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 IPPQ9Y573 584 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 WDFY3Q8IZQ1 3526 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 ANKRD11Q6UB99 2663 aaPredicted RBP11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
TM9SF1-210ENST00000530563 NID2Q14112 1375 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 EML1O00423 815 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 TDP2O95551 362 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 ADRB1P08588 477 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 ITGA4P13612 1032 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 MLH1P40692 756 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 SCNN1GP51170 649 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 PSMC5P62195 406 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 LMNB2Q03252 620 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 LAMTOR4Q0VGL1 99 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 FUT10Q6P4F1 479 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 TSSK4Q6SA08 328 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 RSPO2Q6UXX9 243 aaPredicted RBP11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 CNNM3Q8NE01 707 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 ITFG1Q8TB96 612 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 ATRIPQ8WXE1 791 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 FGF13Q92913 245 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 TMEM143Q96AN5 459 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 RTKNQ9BST9 563 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 PRMT8Q9NR22 394 aaPredicted RBP11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 FBXW11Q9UKB1 542 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 HES2Q9Y543 173 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 MIA3Q5JRA6 1907 aa11.93□□□□□ -0.5
TM9SF1-210ENST00000530563 M0R2N6 131 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 TBC1D4O60343 1298 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 TSPAN1O60635 241 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 TARSP26639 723 aaKnown RBP11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 RPS9P46781 194 aaKnown RBP11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 AMHR2Q16671 573 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 ST3GAL2Q16842 350 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 PRSS55Q6UWB4 352 aaPredicted RBP11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 GLYCTKQ8IVS8 523 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 BICD2Q8TD16 824 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 RABGGTAQ92696 567 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 JPH2Q9BR39 696 aaPredicted RBP11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 ANO2Q9NQ90 1003 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 VPS54Q9P1Q0 977 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 ADAM28Q9UKQ2 775 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 NOTCH4Q99466 2003 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 NBEAQ8NFP9 2946 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 ZFYVE26Q68DK2 2539 aa11.92□□□□□ -0.5
TM9SF1-210ENST00000530563 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 ADAM12O43184 909 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 HNRNPA1P09651 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 CPA1P15085 419 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 MAGEA9P43362 315 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 NPY5RQ15761 445 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 ZBTB41Q5SVQ8 909 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 MTSS1LQ765P7 747 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 LNX1Q8TBB1 728 aaPredicted RBP11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 PSPC1Q8WXF1 523 aaKnown RBP11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 CPB2Q96IY4 423 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 PAAF1Q9BRP4 392 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 CACNG4Q9UBN1 327 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 VAV3Q9UKW4 847 aa11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 CDV3Q9UKY7 258 aaKnown RBP11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
TM9SF1-210ENST00000530563 F5P12259 2224 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 ZBTB39O15060 712 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 POU2F2P09086 479 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 AXLP30530 894 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 HOXA9P31269 272 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 QARSP47897 775 aaKnown RBP11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 PTENP60484 403 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 MTAPQ13126 283 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
TM9SF1-210ENST00000530563 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms