RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 NPAS4Q8IUM7 802 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 GOLGA5Q8TBA6 731 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 PGBD4Q96DM1 585 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 COL25A1Q9BXS0 654 aaPredicted RBP15.76■□□□□ 0.11
UBXN1-209ENST00000528907 GBP3Q9H0R5 595 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 CDT1Q9H211 546 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 KCTD10Q9H3F6 313 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 TRAF3IP3Q9Y228 551 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 PCDHB2Q9Y5E7 798 aa15.76■□□□□ 0.11
UBXN1-209ENST00000528907 UNC80Q8N2C7 3258 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 ANKRD63C9JTQ0 380 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 PDXKO00764 312 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 INPPL1O15357 1258 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 CLDN3O15551 220 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 ATF7P17544 494 aaPredicted RBP15.75■□□□□ 0.11
UBXN1-209ENST00000528907 MYBPC2Q14324 1141 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 LRIT3Q3SXY7 679 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 ZNF568Q3ZCX4 644 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 HACE1Q8IYU2 909 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 TDHQ8IZJ6 230 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 SYCP3Q8IZU3 236 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 ADSSL1Q8N142 457 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 SMG8Q8ND04 991 aaKnown RBP15.75■□□□□ 0.11
UBXN1-209ENST00000528907 BICD1Q96G01 975 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 EIF2AQ9BY44 585 aaKnown RBP15.75■□□□□ 0.11
UBXN1-209ENST00000528907 UBN1Q9NPG3 1134 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 TYW1Q9NV66 732 aaKnown RBP15.75■□□□□ 0.11
UBXN1-209ENST00000528907 MTMR10Q9NXD2 777 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 CXXC1Q9P0U4 656 aaPredicted RBP15.75■□□□□ 0.11
UBXN1-209ENST00000528907 USP20Q9Y2K6 914 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 IPPQ9Y573 584 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 SLC4A7Q9Y6M7 1214 aa15.75■□□□□ 0.11
UBXN1-209ENST00000528907 HOXA2O43364 376 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 FAM189A1O60320 539 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 LETM1O95202 739 aaPredicted RBP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 NPTXRO95502 500 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 ADSSP30520 456 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 GRM5P41594 1212 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 PRCPP42785 496 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 DEFB103AP81534 67 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 NOLC1Q14978 699 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 TMEM132AQ24JP5 1023 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 ZCWPW2Q504Y3 356 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 CT47A1Q5JQC4 288 aaPredicted RBP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 CENPPQ6IPU0 288 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 DHTKD1Q96HY7 919 aaPredicted RBP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 ZBTB45Q96K62 511 aaPredicted RBP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 RNPC3Q96LT9 517 aaKnown RBP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 HAPLN2Q9GZV7 340 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 RALGAPA2Q2PPJ7 1873 aa15.74■□□□□ 0.11
UBXN1-209ENST00000528907 FNDC1Q4ZHG4 1894 aaPredicted RBP15.74■□□□□ 0.11
UBXN1-209ENST00000528907 ZBBXA8MT70 800 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 PPP1R3GB7ZBB8 358 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 OGTO15294 1046 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 DGKIO75912 1065 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 HTRA4P83105 476 aaPredicted RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 STIM1Q13586 685 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 HS2ST1Q7LGA3 356 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 CDR2LQ86X02 465 aaPredicted RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 MLKLQ8NB16 471 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 ZNF689Q96CS4 500 aaPredicted RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 TRIM6Q9C030 488 aaPredicted RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
UBXN1-209ENST00000528907 AGPAT3Q9NRZ7 376 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 PCDHB7Q9Y5E2 793 aa15.73■□□□□ 0.11
UBXN1-209ENST00000528907 CALUO43852 315 aaPredicted RBP15.72■□□□□ 0.11
UBXN1-209ENST00000528907 GJB5O95377 273 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 ADRB2P07550 413 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 ITGA4P13612 1032 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 NLRP12P59046 1061 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 EDRF1Q3B7T1 1238 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 XKR4Q5GH76 650 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 CAVIN1Q6NZI2 390 aaKnown RBP15.72■□□□□ 0.11
UBXN1-209ENST00000528907 AGMOQ6ZNB7 445 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 HERC6Q8IVU3 1022 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 NELFCDQ8IXH7 590 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 SMYD4Q8IYR2 804 aaPredicted RBP15.72■□□□□ 0.11
UBXN1-209ENST00000528907 FBXL18Q96ME1 805 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 CCDC94Q9BW85 323 aaPredicted RBP15.72■□□□□ 0.11
UBXN1-209ENST00000528907 IKZF4Q9H2S9 585 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 KIAA1586Q9HCI6 787 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 DMAC2Q9NW81 257 aa15.72■□□□□ 0.11
UBXN1-209ENST00000528907 CPSF3Q9UKF6 684 aaKnown RBP15.72■□□□□ 0.11
UBXN1-209ENST00000528907 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
UBXN1-209ENST00000528907 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.71■□□□□ 0.11
UBXN1-209ENST00000528907 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.71■□□□□ 0.11
UBXN1-209ENST00000528907 TISP43B9A030 160 aa15.71■□□□□ 0.11
UBXN1-209ENST00000528907 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
UBXN1-209ENST00000528907 BIN1O00499 593 aa15.71■□□□□ 0.11
UBXN1-209ENST00000528907 PSMA7O14818 248 aa15.71■□□□□ 0.11
UBXN1-209ENST00000528907 CD44P16070 742 aaKnown RBP15.71■□□□□ 0.11
UBXN1-209ENST00000528907 ATP2A2P16615 1042 aaKnown RBP15.71■□□□□ 0.11
UBXN1-209ENST00000528907 CCNE1P24864 410 aa15.71■□□□□ 0.11
UBXN1-209ENST00000528907 LRRC63Q05C16 580 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms