RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TLCD1Q96CP7 247 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 TMEM237Q96Q45 408 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 CROCCP2Q86T23 111 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 NT5C1BQ96P26 610 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 C7orf25Q9BPX7 421 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 CLEC11AQ9Y240 323 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 RTN3O95197 1032 aaPredicted RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 LMNB1P20700 586 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 POLGP54098 1239 aaPredicted RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 KCNMA1Q12791 1236 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 DMP1Q13316 513 aaPredicted RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 RCN2Q14257 317 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 RNF220Q5VTB9 566 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 ATXN2LQ8WWM7 1075 aaKnown RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 EZH1Q92800 747 aaPredicted RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 EDEM3Q9BZQ6 932 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 TRPC5Q9UL62 973 aaPredicted RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 PCDHB4Q9Y5E5 795 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 TARSP26639 723 aaKnown RBP19.08■□□□□ 0.65
LTBP3-210ENST00000528516 MMP13P45452 471 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 APBB1IPQ7Z5R6 666 aaPredicted RBP19.08■□□□□ 0.65
LTBP3-210ENST00000528516 EIF1ADQ8N9N8 165 aaKnown RBP19.08■□□□□ 0.65
LTBP3-210ENST00000528516 C1orf54Q8WWF1 131 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 EIF2AK1Q9BQI3 630 aaKnown RBP19.08■□□□□ 0.65
LTBP3-210ENST00000528516 KMT5AQ9NQR1 393 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.08■□□□□ 0.65
LTBP3-210ENST00000528516 ALDH3A1P30838 453 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 ASTE1Q2TB18 679 aaPredicted RBP19.08■□□□□ 0.65
LTBP3-210ENST00000528516 PPP1R15BQ5SWA1 713 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 KCNK18Q7Z418 384 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 SPIRE2Q8WWL2 714 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 ERP27Q96DN0 273 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 ERP44Q9BS26 406 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 COA1Q9GZY4 146 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 KLHL11Q9NVR0 708 aa19.08■□□□□ 0.65
LTBP3-210ENST00000528516 DISP2A7MBM2 1401 aa19.08■□□□□ 0.64
LTBP3-210ENST00000528516 ARHGAP22Q7Z5H3 698 aa19.08■□□□□ 0.64
LTBP3-210ENST00000528516 SH3BP1Q9Y3L3 701 aa19.08■□□□□ 0.64
LTBP3-210ENST00000528516 NWD2Q9ULI1 1742 aa19.08■□□□□ 0.64
LTBP3-210ENST00000528516 LIN7AO14910 233 aaPredicted RBP19.07■□□□□ 0.64
LTBP3-210ENST00000528516 NDUFB10O96000 172 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 UCHL3P15374 230 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 TFAMQ00059 246 aaKnown RBP19.07■□□□□ 0.64
LTBP3-210ENST00000528516 GRB10Q13322 594 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 C10orf76Q5T2E6 689 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 TPCN2Q8NHX9 752 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 MTA3Q9BTC8 594 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 PITPNM3Q9BZ71 974 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 BZW2Q9Y6E2 419 aaKnown RBP19.07■□□□□ 0.64
LTBP3-210ENST00000528516 KIAA1755Q5JYT7 1200 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 PADI6Q6TGC4 694 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 CCDC89Q8N998 374 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 PPFIBP2Q8ND30 876 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 ITFG2Q969R8 447 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 RNF25Q96BH1 459 aaPredicted RBP19.07■□□□□ 0.64
LTBP3-210ENST00000528516 HAO1Q9UJM8 370 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 ZMYND8Q9ULU4 1186 aaPredicted RBP19.07■□□□□ 0.64
LTBP3-210ENST00000528516 SRGAP2CP0DJJ0 459 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 PSMC6P62333 389 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 FITM2Q8N6M3 262 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 SPZ1Q9BXG8 430 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 USH1CQ9Y6N9 552 aa19.07■□□□□ 0.64
LTBP3-210ENST00000528516 GALCP54803 685 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 USP4Q13107 963 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 NKX1-2Q9UD57 310 aaPredicted RBP19.06■□□□□ 0.64
LTBP3-210ENST00000528516 ANAPC7Q9UJX3 599 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 MYH6P13533 1939 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 ZBTB39O15060 712 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 BRAFP15056 766 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 CNGA2Q16280 664 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 CDC42EP5Q6NZY7 148 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 JAMLQ86YT9 394 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 C4orf32Q8N8J7 132 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 PGM2Q96G03 612 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 ZNF277Q9NRM2 450 aaPredicted RBP19.06■□□□□ 0.64
LTBP3-210ENST00000528516 INTUQ9ULD6 942 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 ATF2P15336 505 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 PIK3CAP42336 1068 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 TMED2Q15363 201 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 ANO7Q6IWH7 933 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 LRRC8CQ8TDW0 803 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 RXFP1Q9HBX9 757 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 IPO5O00410 1097 aaKnown RBP19.06■□□□□ 0.64
LTBP3-210ENST00000528516 PPFIA2O75334 1257 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 SERPINB4P48594 390 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 PPP1R18Q6NYC8 613 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 ZNF571Q7Z3V5 609 aaPredicted RBP19.06■□□□□ 0.64
LTBP3-210ENST00000528516 LRRC15Q8TF66 581 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 RNPEPL1Q9HAU8 725 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 NR2E1Q9Y466 385 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 EMSYQ7Z589 1322 aa19.06■□□□□ 0.64
LTBP3-210ENST00000528516 NHSL1Q5SYE7 1610 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 INO80B-WBP1J3KQ70 363 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 ATP5DP30049 168 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 IRX4P78413 519 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 BNIP1Q12981 228 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 KIFC3Q9BVG8 833 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms