RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 CFHR4Q92496 578 aa6.4□□□□□ -1.38
SKP1-211ENST00000523359 DVL3Q92997 716 aaPredicted RBP6.4□□□□□ -1.38
SKP1-211ENST00000523359 GTPBP4Q9BZE4 634 aaKnown RBP6.4□□□□□ -1.38
SKP1-211ENST00000523359 JADE2Q9NQC1 790 aa6.4□□□□□ -1.38
SKP1-211ENST00000523359 NCDNQ9UBB6 729 aa6.4□□□□□ -1.38
SKP1-211ENST00000523359 PUF60Q9UHX1 559 aaKnown RBP6.4□□□□□ -1.38
SKP1-211ENST00000523359 IPPQ9Y573 584 aa6.4□□□□□ -1.38
SKP1-211ENST00000523359 NPEPPSL1A6NEC2 478 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 C1QTNF3-AMACRE9PGA6 284 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 JUNP05412 331 aaKnown RBP6.39□□□□□ -1.39
SKP1-211ENST00000523359 POU2F2P09086 479 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 VSIG10L2P0DP72 767 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 ATF3P18847 181 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 PDCP20941 246 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 LPOP22079 712 aaPredicted RBP6.39□□□□□ -1.39
SKP1-211ENST00000523359 ECHS1P30084 290 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 FXR1P51114 621 aaKnown RBP eCLIP6.39□□□□□ -1.39
SKP1-211ENST00000523359 RAC3P60763 192 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 ICAM4Q14773 271 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 MST1LQ2TV78 715 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 HSP90AB2PQ58FF8 381 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 EPM2AIP1Q7L775 607 aaPredicted RBP6.39□□□□□ -1.39
SKP1-211ENST00000523359 HOXB13Q92826 284 aaPredicted RBP6.39□□□□□ -1.39
SKP1-211ENST00000523359 CLIP3Q96DZ5 547 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 AIFM3Q96NN9 605 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 GPHA2Q96T91 129 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 PSMD1Q99460 953 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 C12orf65Q9H3J6 166 aaKnown RBP6.39□□□□□ -1.39
SKP1-211ENST00000523359 ANLNQ9NQW6 1124 aa6.39□□□□□ -1.39
SKP1-211ENST00000523359 FAM171A2A8MVW0 826 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 MATN2O00339 956 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 GPR42O15529 346 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 MTSS1O43312 755 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 AKAP8O43823 692 aaKnown RBP6.38□□□□□ -1.39
SKP1-211ENST00000523359 WNT3AP56704 352 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 PPP2CBP62714 309 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 PPP2CAP67775 309 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 IL10RAQ13651 578 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 GTF2H3Q13889 308 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 SAFB2Q14151 953 aaKnown RBP eCLIP6.38□□□□□ -1.39
SKP1-211ENST00000523359 ZNF267Q14586 743 aaPredicted RBP6.38□□□□□ -1.39
SKP1-211ENST00000523359 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 MIGA2Q7L4E1 593 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 LILRA3Q8N6C8 439 aaPredicted RBP6.38□□□□□ -1.39
SKP1-211ENST00000523359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.38□□□□□ -1.39
SKP1-211ENST00000523359 TTC8Q8TAM2 541 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 ZNF480Q8WV37 535 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 KAT5Q92993 513 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 HDAC10Q969S8 669 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 NEIL1Q96FI4 390 aaPredicted RBP6.38□□□□□ -1.39
SKP1-211ENST00000523359 PTPN18Q99952 460 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 C7orf25Q9BPX7 421 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 NMRK2Q9NPI5 230 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 PCDHA13Q9Y5I0 950 aa6.38□□□□□ -1.39
SKP1-211ENST00000523359 ARID4BQ4LE39 1312 aaPredicted RBP6.37□□□□□ -1.39
SKP1-211ENST00000523359 ADCY6O43306 1168 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 SLC26A4O43511 780 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 AP1G1O43747 822 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 ITGA10O75578 1167 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 OFD1O75665 1012 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 ENDOD1O94919 500 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 U2AF1L5P0DN76 240 aaPredicted RBP6.37□□□□□ -1.39
SKP1-211ENST00000523359 HSPA6P17066 643 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 CASRP41180 1078 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 PER3P56645 1201 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 U2AF1Q01081 240 aaKnown RBP eCLIP6.37□□□□□ -1.39
SKP1-211ENST00000523359 DUSP2Q05923 314 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 RIN1Q13671 783 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 MINDY4Q4G0A6 757 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 USP45Q70EL2 814 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 SPRED1Q7Z699 444 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 ADGRE4PQ86SQ3 457 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
SKP1-211ENST00000523359 RHOT1Q8IXI2 618 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 CMTM4Q8IZR5 234 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 PRR18Q8N4B5 295 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 SH3RF3Q8TEJ3 882 aaPredicted RBP6.37□□□□□ -1.39
SKP1-211ENST00000523359 RABGGTAQ92696 567 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 HPS3Q969F9 1004 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 RAB24Q969Q5 203 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 LRRC37BQ96QE4 947 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 LMF1Q96S06 567 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 UHRF1Q96T88 793 aaPredicted RBP6.37□□□□□ -1.39
SKP1-211ENST00000523359 DPYSL5Q9BPU6 564 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 SLC12A5Q9H2X9 1139 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 GPRC5DQ9NZD1 345 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 TRPS1Q9UHF7 1281 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 SIK3Q9Y2K2 1263 aa6.37□□□□□ -1.39
SKP1-211ENST00000523359 CDC14BO60729 498 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 DTNBO60941 627 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 FSHBP01225 129 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 GYPEP15421 78 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 SLC6A9P48067 706 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 EPHB4P54760 987 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 CDSNQ15517 529 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 GJC2Q5T442 439 aaPredicted RBP6.36□□□□□ -1.39
SKP1-211ENST00000523359 ZNF585AQ6P3V2 769 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 B3GNT9Q6UX72 402 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 GRAMD1CQ8IYS0 662 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 PQLC1Q8N2U9 271 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms