RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 EPS15L1Q9UBC2 864 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 HES2Q9Y543 173 aa16.55■□□□□ 0.24
PRKDC-204ENST00000521331 DENND4AQ7Z401 1863 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 ZMYM2Q9UBW7 1377 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 FAM186AA6NE01 2351 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 PAPLNO95428 1278 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 KRT2P35908 639 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 CREMQ03060 361 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 CAPSQ13938 189 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 AMHR2Q16671 573 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 EARS2Q5JPH6 523 aaKnown RBP16.54■□□□□ 0.24
PRKDC-204ENST00000521331 FRMD5Q7Z6J6 570 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 CCDC105Q8IYK2 499 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 ASAP3Q8TDY4 903 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
PRKDC-204ENST00000521331 ZFP42Q96MM3 310 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 HSD17B14Q9BPX1 270 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 APOL6Q9BWW8 343 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 GJB4Q9NTQ9 266 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 ORC3Q9UBD5 711 aaPredicted RBP16.54■□□□□ 0.24
PRKDC-204ENST00000521331 WNT16Q9UBV4 365 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 TPCN1Q9ULQ1 816 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 PCDHA12Q9UN75 941 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 CFAP54Q96N23 3096 aa16.54■□□□□ 0.24
PRKDC-204ENST00000521331 PI15O43692 258 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
PRKDC-204ENST00000521331 RFPL2O75678 378 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 ARF4P18085 180 aaPredicted RBP16.53■□□□□ 0.24
PRKDC-204ENST00000521331 ARL2P36404 184 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 FOXK2Q01167 660 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 ANKRD1Q15327 319 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 CALCRLQ16602 461 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 FUT10Q6P4F1 479 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 SLC27A1Q6PCB7 646 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 NXF3Q9H4D5 531 aaKnown RBP16.53■□□□□ 0.24
PRKDC-204ENST00000521331 ZDHHC7Q9NXF8 308 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 FNIP2Q9P278 1114 aa16.53■□□□□ 0.24
PRKDC-204ENST00000521331 F8W810 466 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 GRIK3Q13003 919 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 NR5A1Q13285 461 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 DTWD2Q8NBA8 298 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 TNFRSF25Q93038 417 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 ZNF707Q96C28 371 aaPredicted RBP16.52■□□□□ 0.24
PRKDC-204ENST00000521331 NT5C3AQ9H0P0 336 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 PIDD1Q9HB75 910 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRKDC-204ENST00000521331 ADAM28Q9UKQ2 775 aa16.52■□□□□ 0.24
PRKDC-204ENST00000521331 PLXNA3P51805 1871 aa16.52■□□□□ 0.23
PRKDC-204ENST00000521331 A0A1B0GUA9 196 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 FAM205CA6NFA0 338 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 TGM5O43548 720 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 NARSO43776 548 aaKnown RBP16.51■□□□□ 0.23
PRKDC-204ENST00000521331 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 NPTXRO95502 500 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 SRFP11831 508 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 XRCC6P12956 609 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKDC-204ENST00000521331 RFX1P22670 979 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 GLRA2P23416 452 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 AKAP5P24588 427 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 RARRES1P49788 294 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 ANGPT1Q15389 498 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 PALB2Q86YC2 1186 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 SLC44A3Q8N4M1 653 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 GSTCDQ8NEC7 633 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 RSAD2Q8WXG1 361 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 MYADMQ96S97 322 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 GPR62Q9BZJ7 368 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
PRKDC-204ENST00000521331 TTC12Q9H892 705 aaPredicted RBP16.51■□□□□ 0.23
PRKDC-204ENST00000521331 GVINP1Q7Z2Y8 2422 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 SPTBN4Q9H254 2564 aa16.51■□□□□ 0.23
PRKDC-204ENST00000521331 SF3B1O75533 1304 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRKDC-204ENST00000521331 STK25O00506 426 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 B4GALT5O43286 388 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 NEMFO60524 1076 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 TADA2AO75478 443 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 CFHP08603 1231 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 SPATA31D3P0C874 917 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 MYBP10242 640 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 LILRA6Q6PI73 481 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 SPATA31D4Q6ZUB0 917 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
PRKDC-204ENST00000521331 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 PRIMPOLQ96LW4 560 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 PARP2Q9UGN5 583 aa16.5■□□□□ 0.23
PRKDC-204ENST00000521331 KRBA1A5PL33 1030 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 USO1O60763 962 aaKnown RBP16.49■□□□□ 0.23
PRKDC-204ENST00000521331 LAMP2P13473 410 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 TXKP42681 527 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 ANAPC15P60006 121 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
PRKDC-204ENST00000521331 MCPH1Q8NEM0 835 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 PIGOQ8TEQ8 1089 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 PRMT7Q9NVM4 692 aaPredicted RBP16.49■□□□□ 0.23
PRKDC-204ENST00000521331 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
PRKDC-204ENST00000521331 ZFP37Q9Y6Q3 630 aaPredicted RBP16.49■□□□□ 0.23
PRKDC-204ENST00000521331 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms