RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 DEFB128Q7Z7B8 93 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF598Q86UK7 904 aaKnown RBP6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 RTN4RL1Q86UN2 441 aaPredicted RBP6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 ECHDC2Q86YB7 292 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 NT5DC4Q86YG4 428 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 NPAS4Q8IUM7 802 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZC3H3Q8IXZ2 948 aaKnown RBP6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 SYCP3Q8IZU3 236 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 LINC01599Q8WXQ3 324 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 TOP1MTQ969P6 601 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 FBXL18Q96ME1 805 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 PPP1R16BQ96T49 567 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 ADAM2Q99965 735 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 ANP32EQ9BTT0 268 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 MKNK1Q9BUB5 465 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 KIFC3Q9BVG8 833 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 TARS2Q9BW92 718 aaKnown RBP6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 PLEKHA5Q9HAU0 1116 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 ANO10Q9NW15 660 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 DMAC2Q9NW81 257 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 GDAQ9Y2T3 454 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 GIT1Q9Y2X7 761 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 DNAH12Q6ZR08 3092 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 GBF1Q92538 1859 aa6.96□□□□□ -1.3
IGHV4-55-201ENST00000520889 B4GALT5O43286 388 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 EXTL3O43909 919 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM189A1O60320 539 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 MGEA5O60502 916 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 FGFR1OPO95684 399 aaKnown RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 EDN1P05305 212 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 CCDC192P0DO97 292 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 BMP6P22004 513 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 ADSSP30520 456 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 KCNJ6P48051 423 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 WDR5P61964 334 aaKnown RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 KCNA1Q09470 495 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 SURF1Q15526 300 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 STX1AQ16623 288 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM132AQ24JP5 1023 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF568Q3ZCX4 644 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 XKR4Q5GH76 650 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 CAVIN1Q6NZI2 390 aaKnown RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 SLC39A4Q6P5W5 647 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 USP37Q86T82 979 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 GPD1LQ8N335 351 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 XXYLT1Q8NBI6 393 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 SMG8Q8ND04 991 aaKnown RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 P2RX5Q93086 422 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 HPS3Q969F9 1004 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 BICD1Q96G01 975 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF668Q96K58 619 aaPredicted RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 CEP63Q96MT8 703 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 TSG101Q99816 390 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 BPIFA3Q9BQP9 254 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 TCHPQ9BT92 498 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 CCDC94Q9BW85 323 aaPredicted RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 FGFBP2Q9BYJ0 223 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 OSBPL7Q9BZF2 842 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 TRIM6Q9C030 488 aaPredicted RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 CDT1Q9H211 546 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 ASB7Q9H672 318 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 RC3H2Q9HBD1 1191 aaKnown RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 AGPAT3Q9NRZ7 376 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 TOPORSQ9NS56 1045 aaPredicted RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 RWDD2AQ9UIY3 292 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 CPSF3Q9UKF6 684 aaKnown RBP6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 IPPQ9Y573 584 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 PCDHB7Q9Y5E2 793 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 PCDHB2Q9Y5E7 798 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 SLC4A7Q9Y6M7 1214 aa6.95□□□□□ -1.3
IGHV4-55-201ENST00000520889 NLRC5Q86WI3 1866 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 TTLL13PA6NNM8 815 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ANKRD63C9JTQ0 380 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 SLC16A3O15427 465 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 CSDE1O75534 798 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 DGKIO75912 1065 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 IL18RAPO95256 599 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 GJB5O95377 273 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 GNA14O95837 355 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 CLTAP09496 248 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ACRP10323 421 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ITGA4P13612 1032 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 ATF7P17544 494 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 FGFR4P22455 802 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 PAX3P23760 479 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 AP3M2P53677 418 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 YARSP54577 528 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 EPHB4P54760 987 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 MARSP56192 900 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 HTRA4P83105 476 aaPredicted RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 FKBP3Q00688 224 aaKnown RBP6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 PAK1Q13153 545 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 EEF1DP3Q658K8 133 aa6.94□□□□□ -1.3
IGHV4-55-201ENST00000520889 SMYD5Q6GMV2 418 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms