RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ARF4P18085 180 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 FGFR4P22455 802 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 EIF4BP23588 611 aaKnown RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 CRYBB1P53674 252 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 UBXN1Q04323 297 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 PPP2R3AQ06190 1150 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 MCL1Q07820 350 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 MGAT3Q09327 533 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 BFSP1Q12934 665 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 PTK7Q13308 1070 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 NOLC1Q14978 699 aaKnown RBP eCLIP11.53□□□□□ -0.561e-9■■■□□ 14.9
PABPC1-203ENST00000517921 SNRNP35Q16560 246 aaKnown RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 TRIM71Q2Q1W2 868 aaKnown RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 DCAF17Q5H9S7 520 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 EEF1DP3Q658K8 133 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 INTS8Q75QN2 995 aaKnown RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 TMC6Q7Z403 805 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 RSPH3Q86UC2 560 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 RDH13Q8NBN7 331 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 SPC24Q8NBT2 197 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 PLEKHO2Q8TD55 490 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 TMEM40Q8WWA1 233 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 SLC35C1Q96A29 364 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 MSTO1Q9BUK6 570 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 CDT1Q9H211 546 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 NDST4Q9H3R1 872 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 PDZD7Q9H5P4 517 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 AGO2Q9UKV8 859 aaKnown RBP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 GINS2Q9Y248 185 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 TNFSF13BQ9Y275 285 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.53□□□□□ -0.56
PABPC1-203ENST00000517921 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 ITIH6Q6UXX5 1313 aa11.53□□□□□ -0.56
PABPC1-203ENST00000517921 SCN1AP35498 2009 aa11.52□□□□□ -0.56
PABPC1-203ENST00000517921 M0QZ92 97 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CLDN3O15551 220 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 B4GALT4O60513 344 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CTSHP09668 335 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 HARSP12081 509 aaKnown RBP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 MATR3P43243 847 aaKnown RBP eCLIP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CYP24A1Q07973 514 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 PCBP1Q15365 356 aaKnown RBP eCLIP11.52□□□□□ -0.579e-40■■■■□ 21.2
PABPC1-203ENST00000517921 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 ZNF568Q3ZCX4 644 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 ZBTB41Q5SVQ8 909 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CRELD2Q6UXH1 353 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CATSPER4Q7RTX7 472 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 ZBTB33Q86T24 672 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CDR2LQ86X02 465 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 DRC7Q8IY82 874 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 CPB2Q96IY4 423 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 MFSD14AQ96MC6 490 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 ERGIC2Q96RQ1 377 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 FAM213AQ9BRX8 229 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 SEZ6LQ9BYH1 1024 aa11.52□□□□□ -0.57
PABPC1-203ENST00000517921 SENP6Q9GZR1 1112 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-203ENST00000517921 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 OGTO15294 1046 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 LDHAP00338 332 aaKnown RBP11.51□□□□□ -0.57
PABPC1-203ENST00000517921 CHRNA1P02708 482 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 AFPP02771 609 aaKnown RBP11.51□□□□□ -0.57
PABPC1-203ENST00000517921 TRIM49P0CI25 452 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 TRIM49CP0CI26 452 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 KRT13P13646 458 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 SFPQP23246 707 aaKnown RBP eCLIP11.51□□□□□ -0.57
PABPC1-203ENST00000517921 THPOP40225 353 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 CDK7P50613 346 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 VAMP7P51809 220 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 WNT7BP56706 349 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 ENPEPQ07075 957 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-203ENST00000517921 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 TCERG1LQ5VWI1 586 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 SPECC1LQ69YQ0 1117 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 FAM228AQ86W67 206 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 TRPV6Q9H1D0 765 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 KIAA1586Q9HCI6 787 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 AGPAT5Q9NUQ2 364 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 SIK3Q9Y2K2 1263 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 NR2E3Q9Y5X4 410 aa11.51□□□□□ -0.57
PABPC1-203ENST00000517921 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 ZNF233A6NK53 670 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 CAND2O75155 1236 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 MCF2P10911 925 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 AXLP30530 894 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-203ENST00000517921 TNFSF9P41273 254 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 ACOT2P49753 483 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 DLG4P78352 724 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 TBX2Q13207 712 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-203ENST00000517921 PSMD6Q15008 389 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 SYCP1Q15431 976 aa11.5□□□□□ -0.57
PABPC1-203ENST00000517921 DCAF4L1Q3SXM0 396 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms