RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	DSC1	Q08554	894 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	USP41	Q3LFD5	358 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	LIN9	Q5TKA1	542 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	LRCH2	Q5VUJ6	765 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	FUT10	Q6P4F1	479 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	PRR23C	Q6ZRP0	262 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	EXOC6	Q8TAG9	804 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	GJA10	Q969M2	543 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	NELL2	Q99435	816 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	TEKT3	Q9BXF9	490 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	GPR62	Q9BZJ7	368 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	MINDY3	Q9H8M7	445 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	FNIP2	Q9P278	1114 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	FBXW11	Q9UKB1	542 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	CEP295	Q9C0D2	2601 aa		11.76	□□□□□ -0.53
CLDND1-231	ENST00000515620	DDX11L8	A8MPP1	907 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	SLC27A2	O14975	620 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	GDF9	O60383	454 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	LRP3	O75074	770 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	MAF	O75444	373 aa	Predicted RBP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	STBD1	O95210	358 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	C8A	P07357	584 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	RET	P07949	1114 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	HOXA11	P31270	313 aa	Predicted RBP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	CIITA	P33076	1130 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	PPM1L	Q5SGD2	360 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	PLA2G4F	Q68DD2	849 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	ZNF852	Q6ZMS4	543 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	MIER3	Q7Z3K6	550 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	NPAS3	Q8IXF0	933 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	SMG8	Q8ND04	991 aa	Known RBP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	ING5	Q8WYH8	240 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	RABGGTA	Q92696	567 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	SLC5A5	Q92911	643 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	CCDC136	Q96JN2	1154 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	ZFP42	Q96MM3	310 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	MBOAT7	Q96N66	472 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	RIT2	Q99578	217 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	COLEC11	Q9BWP8	271 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	APOL6	Q9BWW8	343 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	EIF2A	Q9BY44	585 aa	Known RBP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	UBN1	Q9NPG3	1134 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	HEBP1	Q9NRV9	189 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	SEMA4G	Q9NTN9	838 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	NDRG2	Q9UN36	371 aa	Known RBP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	MRPS17	Q9Y2R5	130 aa	Known RBP	11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	HES2	Q9Y543	173 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	IPP	Q9Y573	584 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	COL4A3BP	Q9Y5P4	624 aa		11.75	□□□□□ -0.53
CLDND1-231	ENST00000515620	ESYT2	A0FGR8	921 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	GOLGA8A	A7E2F4	631 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	GOLGA8B	A8MQT2	603 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	ZBTB43	O43298	467 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	XYLB	O75191	536 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	SRGAP2C	P0DJJ0	459 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	TDGF1	P13385	188 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	PML	P29590	882 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	NRL	P54845	237 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	ADCY1	Q08828	1119 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	FZD5	Q13467	585 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	PFKFB3	Q16875	520 aa	Predicted RBP	11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	RTP2	Q5QGT7	225 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	GPR65	Q8IYL9	337 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	CELF5	Q8N6W0	485 aa	Known RBP	11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	ZMYND12	Q9H0C1	365 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	C6orf50	Q9HD87	102 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	HCFC1R1	Q9NWW0	138 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	MIOS	Q9NXC5	875 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	ADAM28	Q9UKQ2	775 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	BRPF3	Q9ULD4	1205 aa		11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.74	□□□□□ -0.53
CLDND1-231	ENST00000515620	ERLIN2	O94905	339 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	HOXB3	P14651	431 aa	Predicted RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	CDC27	P30260	824 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	SIM2	Q14190	667 aa	Predicted RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	PPP2R5D	Q14738	602 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	CSRP2	Q16527	193 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	PABPC1L	Q4VXU2	614 aa	Known RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	IL31	Q6EBC2	164 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	ANO5	Q75V66	913 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	SRGAP1	Q7Z6B7	1085 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	CNNM3	Q8NE01	707 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	RDM1	Q8NG50	284 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	SLC7A14	Q8TBB6	771 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	DDX1	Q92499	740 aa	Known RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	DOCK6	Q96HP0	2047 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	TCEANC2	Q96MN5	208 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	JPH2	Q9BR39	696 aa	Predicted RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	CHRD	Q9H2X0	955 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	CACNG4	Q9UBN1	327 aa		11.73	□□□□□ -0.53
CLDND1-231	ENST00000515620	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	SHISA7	A6NL88	538 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	TADA2A	O75478	443 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	PSMD10	O75832	226 aa		11.72	□□□□□ -0.53
CLDND1-231	ENST00000515620	HOXA9	P31269	272 aa		11.72	□□□□□ -0.53

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