RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 PBX4Q9BYU1 374 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 TMEM206Q9H813 350 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 RMND1Q9NWS8 449 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 PCDHA11Q9Y5I1 949 aa23.02■■□□□ 1.28
NEIL3-202ENST00000513321 TISP43B9A030 160 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 MCF2P10911 925 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 ITGA4P13612 1032 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 MATR3P43243 847 aaKnown RBP eCLIP23.01■■□□□ 1.27
NEIL3-202ENST00000513321 AGMOQ6ZNB7 445 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 APOL6Q9BWW8 343 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 HAPLN2Q9GZV7 340 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 CLSTN2Q9H4D0 955 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 RNF19AQ9NV58 838 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 MSRAQ9UJ68 235 aa23.01■■□□□ 1.27
NEIL3-202ENST00000513321 PTPRSQ13332 1948 aa23■■□□□ 1.27
NEIL3-202ENST00000513321 HOXA2O43364 376 aa23■■□□□ 1.27
NEIL3-202ENST00000513321 HARSP12081 509 aaKnown RBP23■■□□□ 1.27
NEIL3-202ENST00000513321 MCL1Q07820 350 aa23■■□□□ 1.27
NEIL3-202ENST00000513321 HABP4Q5JVS0 413 aaKnown RBP23■■□□□ 1.27
NEIL3-202ENST00000513321 NELFCDQ8IXH7 590 aa23■■□□□ 1.27
NEIL3-202ENST00000513321 HACE1Q8IYU2 909 aa23■■□□□ 1.27
NEIL3-202ENST00000513321 ZNF689Q96CS4 500 aaPredicted RBP23■■□□□ 1.27
NEIL3-202ENST00000513321 GDAQ9Y2T3 454 aa23■■□□□ 1.27
NEIL3-202ENST00000513321 YBX2Q9Y2T7 364 aaKnown RBP23■■□□□ 1.27
NEIL3-202ENST00000513321 AKAP5P24588 427 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 NOLC1Q14978 699 aaKnown RBP eCLIP22.99■■□□□ 1.27
NEIL3-202ENST00000513321 RAB30Q15771 203 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 BMT2Q1RMZ1 405 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 CLLU1OSQ5K130 101 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 SLFN12LQ6IEE8 588 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 HELQQ8TDG4 1101 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 SNTG2Q9NY99 539 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 STYXL1Q9Y6J8 313 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 UBE4BO95155 1302 aa22.99■■□□□ 1.27
NEIL3-202ENST00000513321 A0A0B4J269 797 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 LCHNA4D1U4 455 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 MBD3O95983 291 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 ISM2Q6H9L7 571 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 GLB1LQ6UWU2 654 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 THNSL1Q8IYQ7 743 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 ABI1Q8IZP0 508 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 CEP120Q8N960 986 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 CASD1Q96PB1 797 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 TMEM117Q9H0C3 514 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 NUP62CLQ9H1M0 184 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 RSAD1Q9HA92 442 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 RC3H2Q9HBD1 1191 aaKnown RBP22.98■■□□□ 1.27
NEIL3-202ENST00000513321 UBN1Q9NPG3 1134 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 PARP2Q9UGN5 583 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 MAN1B1Q9UKM7 699 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 TBKBP1A7MCY6 615 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 SOX1O00570 391 aaPredicted RBP22.98■■□□□ 1.27
NEIL3-202ENST00000513321 OFD1O75665 1012 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 ADSSP30520 456 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 OSTNP61366 133 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 KNOP1Q1ED39 458 aaKnown RBP22.98■■□□□ 1.27
NEIL3-202ENST00000513321 PAN2Q504Q3 1202 aaKnown RBP22.98■■□□□ 1.27
NEIL3-202ENST00000513321 MSTO1Q9BUK6 570 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 GBP3Q9H0R5 595 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 KIAA1468Q9P260 1216 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 MAPK8IP1Q9UQF2 711 aa22.98■■□□□ 1.27
NEIL3-202ENST00000513321 LAMA2P24043 3122 aaKnown RBP22.97■■□□□ 1.27
NEIL3-202ENST00000513321 CA3P07451 260 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 DNAJB2P25686 324 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 GRM5P41594 1212 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 BTG3Q14201 252 aaPredicted RBP22.97■■□□□ 1.27
NEIL3-202ENST00000513321 SEZ6Q53EL9 994 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 ZNF658Q5TYW1 1059 aaPredicted RBP22.97■■□□□ 1.27
NEIL3-202ENST00000513321 SMYD4Q8IYR2 804 aaPredicted RBP22.97■■□□□ 1.27
NEIL3-202ENST00000513321 SP7Q8TDD2 431 aaPredicted RBP22.97■■□□□ 1.27
NEIL3-202ENST00000513321 POMGNT1Q8WZA1 660 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 CCDC94Q9BW85 323 aaPredicted RBP22.97■■□□□ 1.27
NEIL3-202ENST00000513321 NKX2-4Q9H2Z4 354 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 KLK14Q9P0G3 267 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 INPP5FQ9Y2H2 1132 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 GIT1Q9Y2X7 761 aa22.97■■□□□ 1.27
NEIL3-202ENST00000513321 ZMYM2Q9UBW7 1377 aa22.96■■□□□ 1.27
NEIL3-202ENST00000513321 BIN1O00499 593 aa22.96■■□□□ 1.27
NEIL3-202ENST00000513321 TGFB1I1O43294 461 aa22.96■■□□□ 1.27
NEIL3-202ENST00000513321 TMEM192Q8IY95 271 aa22.96■■□□□ 1.27
NEIL3-202ENST00000513321 CMTR2Q8IYT2 770 aaKnown RBP22.96■■□□□ 1.27
NEIL3-202ENST00000513321 GAD1Q99259 594 aa22.96■■□□□ 1.27
NEIL3-202ENST00000513321 LAMA3Q16787 3333 aa22.96■■□□□ 1.27
NEIL3-202ENST00000513321 ARL5CA6NH57 179 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 OGTO15294 1046 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 RECQL4O94761 1208 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 KIF20AO95235 890 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 AFF1P51825 1210 aaKnown RBP22.95■■□□□ 1.26
NEIL3-202ENST00000513321 NOMO2Q5JPE7 1267 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 GUF1Q8N442 669 aaKnown RBP22.95■■□□□ 1.26
NEIL3-202ENST00000513321 FIBCD1Q8N539 461 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 TIFAQ96CG3 184 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 ACAP3Q96P50 834 aa22.95■■□□□ 1.26
NEIL3-202ENST00000513321 GTPBP4Q9BZE4 634 aaKnown RBP22.95■■□□□ 1.26
NEIL3-202ENST00000513321 AGO2Q9UKV8 859 aaKnown RBP22.95■■□□□ 1.26
NEIL3-202ENST00000513321 ARHGEF15O94989 841 aa22.94■■□□□ 1.26
NEIL3-202ENST00000513321 GARTP22102 1010 aa22.94■■□□□ 1.26
NEIL3-202ENST00000513321 MLH1P40692 756 aa22.94■■□□□ 1.26
NEIL3-202ENST00000513321 HS2ST1Q7LGA3 356 aa22.94■■□□□ 1.26
NEIL3-202ENST00000513321 LRCH3Q96II8 777 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms