RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
LETM1-207ENST00000512669 ANKEF1Q9NU02 776 aa16.15■□□□□ 0.18
LETM1-207ENST00000512669 C2orf16Q68DN1 1984 aa16.15■□□□□ 0.18
LETM1-207ENST00000512669 LILRB3O75022 631 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 LONRF3Q496Y0 759 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 UBXN11Q5T124 520 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 KANK3Q6NY19 840 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 ASAP3Q8TDY4 903 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 HDAC7Q8WUI4 952 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 TCP11Q8WWU5 503 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 MTRQ99707 1265 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 HERC2P3Q9BVR0 1158 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 WNT16Q9UBV4 365 aa16.14■□□□□ 0.17
LETM1-207ENST00000512669 ASAP2O43150 1006 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 NR1I2O75469 434 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 NPR3P17342 541 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 NCLP19338 710 aaKnown RBP16.13■□□□□ 0.17
LETM1-207ENST00000512669 ARL2P36404 184 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 ANGPT1Q15389 498 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 ECM1Q16610 540 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 SIX5Q8N196 739 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 DTWD2Q8NBA8 298 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 RNF149Q8NC42 400 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 CCDC51Q96ER9 411 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 WDR6Q9NNW5 1121 aaKnown RBP16.13■□□□□ 0.17
LETM1-207ENST00000512669 MAN1C1Q9NR34 630 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
LETM1-207ENST00000512669 NRP1O14786 923 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 INPPL1O15357 1258 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 DDHD2O94830 711 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 ERLIN2O94905 339 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 GLUD1P00367 558 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 SSBP05455 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
LETM1-207ENST00000512669 XRCC6P12956 609 aaKnown RBP eCLIP16.12■□□□□ 0.17
LETM1-207ENST00000512669 RFX1P22670 979 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 AXLP30530 894 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 NCBP1Q09161 790 aaKnown RBP16.12■□□□□ 0.17
LETM1-207ENST00000512669 ORC2Q13416 577 aaPredicted RBP16.12■□□□□ 0.17
LETM1-207ENST00000512669 IL17AQ16552 155 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 GPR65Q8IYL9 337 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 ADSSL1Q8N142 457 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 RPS6KC1Q96S38 1066 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 POLR3CQ9BUI4 534 aaPredicted RBP16.12■□□□□ 0.17
LETM1-207ENST00000512669 TUFT1Q9NNX1 390 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 EPS15L1Q9UBC2 864 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 CLUHO75153 1309 aa16.12■□□□□ 0.17
LETM1-207ENST00000512669 B4GALT3O60512 393 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 DGAT1O75907 488 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 PAPLNO95428 1278 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 ITGA4P13612 1032 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 GLRA2P23416 452 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 ID4P47928 161 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 GLUD2P49448 558 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
LETM1-207ENST00000512669 PTENP60484 403 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 CAPSQ13938 189 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 AMHR2Q16671 573 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 POTEGQ6S5H5 508 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 IFNLR1Q8IU57 520 aaPredicted RBP16.11■□□□□ 0.17
LETM1-207ENST00000512669 HACE1Q8IYU2 909 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 PLEKHA4Q9H4M7 779 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 RXFP1Q9HBX9 757 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
LETM1-207ENST00000512669 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.11■□□□□ 0.17
LETM1-207ENST00000512669 CCDC195A0A1B0GUA6 201 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 POMCP01189 267 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 SRFP11831 508 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 RPA1P27694 616 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 GJB2P29033 226 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 GBP2P32456 591 aaPredicted RBP16.1■□□□□ 0.17
LETM1-207ENST00000512669 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
LETM1-207ENST00000512669 CREMQ03060 361 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 PTGDRQ13258 359 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 MXD4Q14582 209 aaPredicted RBP16.1■□□□□ 0.17
LETM1-207ENST00000512669 NOTUMQ6P988 496 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 COLGALT2Q8IYK4 626 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 RNF168Q8IYW5 571 aaPredicted RBP16.1■□□□□ 0.17
LETM1-207ENST00000512669 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
LETM1-207ENST00000512669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.1■□□□□ 0.17
LETM1-207ENST00000512669 STK25O00506 426 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 C2CD2LO14523 706 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 TEX28O15482 410 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 PI15O43692 258 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 TSPAN1O60635 241 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 OR1G1P47890 313 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 DSG1Q02413 1049 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 MBTD1Q05BQ5 628 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 DSC1Q08554 894 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 ZC3H14Q6PJT7 736 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 MAEAQ7L5Y9 396 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 SMG8Q8ND04 991 aaKnown RBP16.09■□□□□ 0.17
LETM1-207ENST00000512669 BSNDQ8WZ55 320 aa16.09■□□□□ 0.17
LETM1-207ENST00000512669 SMG7Q92540 1137 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms