RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 MRPL38Q96DV4 380 aaKnown RBP9.64□□□□□ -0.87
PDPN-209ENST00000510906 FAM20AQ96MK3 541 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 CEP89Q96ST8 783 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 KIF2CQ99661 725 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 ADAM2Q99965 735 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 ADAMTS10Q9H324 1103 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 BRMS1Q9HCU9 246 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 WRAP73Q9P2S5 460 aaPredicted RBP9.64□□□□□ -0.87
PDPN-209ENST00000510906 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
PDPN-209ENST00000510906 USP34Q70CQ2 3546 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 C9IYK1 514 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 TGFBR3LH3BV60 316 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 TBX3O15119 743 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 MARCH6O60337 910 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 P4HBP07237 508 aaKnown RBP9.63□□□□□ -0.87
PDPN-209ENST00000510906 STAG3L1P0CL83 205 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 FGFR4P22455 802 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 MZF1P28698 734 aaPredicted RBP9.63□□□□□ -0.87
PDPN-209ENST00000510906 SARSP49591 514 aaKnown RBP9.63□□□□□ -0.87
PDPN-209ENST00000510906 GPC3P51654 580 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 KCNQ1P51787 676 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 NPEPPSP55786 919 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 PSMC5P62195 406 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 GUCY1B3Q02153 619 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 PLA2G4FQ68DD2 849 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 ANO5Q75V66 913 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 CMTR2Q8IYT2 770 aaKnown RBP9.63□□□□□ -0.87
PDPN-209ENST00000510906 NAP1L4Q99733 375 aaKnown RBP9.63□□□□□ -0.87
PDPN-209ENST00000510906 RGS18Q9NS28 235 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 MRPL42Q9Y6G3 142 aaKnown RBP9.63□□□□□ -0.87
PDPN-209ENST00000510906 CACNA1GO43497 2377 aa9.63□□□□□ -0.87
PDPN-209ENST00000510906 TTC3P53804 2025 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 IGKV6-21A0A0C4DH24 114 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 C5orf67F2Z3F1 127 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 GRM6O15303 877 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 CSDE1O75534 798 aaKnown RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 BMP1P13497 986 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 DARSP14868 501 aaKnown RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 QARSP47897 775 aaKnown RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 SPIRE1Q08AE8 756 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 POU4F2Q12837 409 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 TRIM29Q14134 588 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 EPHA7Q15375 998 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 PTPROQ16827 1216 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 CTC1Q2NKJ3 1217 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 ODR4Q5SWX8 454 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 NCAPH2Q6IBW4 605 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 SLC24A5Q71RS6 500 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 LYSMD3Q7Z3D4 306 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 TREML1Q86YW5 311 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 MRRFQ96E11 262 aaKnown RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 DYDC2Q96IM9 177 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 SCLT1Q96NL6 688 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 NECAB3Q96P71 396 aaPredicted RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 C11orf84Q9BUA3 381 aaPredicted RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 C1orf112Q9NSG2 853 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 RGL1Q9NZL6 768 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 DMGDHQ9UI17 866 aaKnown RBP9.62□□□□□ -0.87
PDPN-209ENST00000510906 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 COG5Q9UP83 839 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 PCDHB7Q9Y5E2 793 aa9.62□□□□□ -0.87
PDPN-209ENST00000510906 A0A087WZ62 844 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 FAM187AA6NFU0 413 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 MAFO75444 373 aaPredicted RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 CSPG5O95196 566 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 BAG4O95429 457 aaKnown RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 PDGFAP04085 211 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 RB1P06400 928 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 FGFR1P11362 822 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 FAM189BP81408 668 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 CYP4A11Q02928 519 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 CTTNQ14247 550 aaKnown RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 AAK1Q2M2I8 961 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 TIGD5Q53EQ6 642 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 TCEAL5Q5H9L2 206 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 TRIM46Q7Z4K8 759 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 KSR1Q8IVT5 923 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 SLFN12Q8IYM2 578 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 UHRF1Q96T88 793 aaPredicted RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 FDXACB1Q9BRP7 624 aaPredicted RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 LXNQ9BS40 222 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 UBE2ZQ9H832 354 aaPredicted RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 ATP6V0A4Q9HBG4 840 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 ALG13Q9NP73 1137 aaKnown RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 CYP26B1Q9NR63 512 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 SUCLA2Q9P2R7 463 aaPredicted RBP9.61□□□□□ -0.87
PDPN-209ENST00000510906 CFAP54Q96N23 3096 aa9.61□□□□□ -0.87
PDPN-209ENST00000510906 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.6□□□□□ -0.87
PDPN-209ENST00000510906 A0A1B0GTH6 734 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 TBKBP1A7MCY6 615 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 NEMFO60524 1076 aa9.6□□□□□ -0.87
PDPN-209ENST00000510906 DKC1O60832 514 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDPN-209ENST00000510906 ITGB1P05556 798 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms