RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 FUT10Q6P4F1 479 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 MTSS1LQ765P7 747 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 TMEM143Q96AN5 459 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 GMEB2Q9UKD1 530 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 POLIQ9UNA4 740 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 HES2Q9Y543 173 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 IPPQ9Y573 584 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 FANCMQ8IYD8 2048 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 CACNA1GO43497 2377 aa12.94□□□□□ -0.34
CCHCR1-219ENST00000505392 NPEPPSP55786 919 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 SPEM2Q0P670 501 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 PPM1JQ5JR12 505 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 PRSS55Q6UWB4 352 aaPredicted RBP12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 GPR65Q8IYL9 337 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 SLC7A3Q8WY07 619 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 RABGGTAQ92696 567 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 CLDN23Q96B33 292 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 ZFP42Q96MM3 310 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 KXD1Q9BQD3 176 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
CCHCR1-219ENST00000505392 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 CCDC196A0A1B0GTZ2 297 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 CCL16O15467 120 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 TADA2AO75478 443 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 ERLIN2O94905 339 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 TARSP26639 723 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 PSMC5P62195 406 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 LAMTOR4Q0VGL1 99 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 FZD5Q13467 585 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 LPAL2Q16609 132 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 PPM1LQ5SGD2 360 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 B3GNT9Q6UX72 402 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 TPRG1Q6ZUI0 275 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 ITFG1Q8TB96 612 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 APOL6Q9BWW8 343 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 ADAM28Q9UKQ2 775 aa12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-219ENST00000505392 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 HNRNPA1P09651 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 RPS9P46781 194 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 CREMQ03060 361 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 ADCY1Q08828 1119 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 NCBP1Q09161 790 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 MTAPQ13126 283 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 Q4G0T1 1027 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 ZNF852Q6ZMS4 543 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 GSTCDQ8NEC7 633 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 ESYT1Q9BSJ8 1104 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 FAM126AQ9BYI3 521 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 RALYQ9UKM9 306 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 RAB23Q9ULC3 237 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
CCHCR1-219ENST00000505392 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 SLC30A4O14863 429 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 ASAP2O43150 1006 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 C8AP07357 584 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 AKAP5P24588 427 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 AXLP30530 894 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 RCAN1P53805 252 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 NRLP54845 237 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 ADCK5Q3MIX3 580 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 NOTUMQ6P988 496 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 CELF5Q8N6W0 485 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 NETO1Q8TDF5 533 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 PRMT8Q9NR22 394 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 HEBP1Q9NRV9 189 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 FBXW11Q9UKB1 542 aa12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 MRPS17Q9Y2R5 130 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-219ENST00000505392 EML1O00423 815 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 TSPAN1O60635 241 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 XYLBO75191 536 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 TDP2O95551 362 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 QARSP47897 775 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 FGD1P98174 961 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms