RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 SMCO2A6NFE2 343 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 GOLGA8KD6RF30 607 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 FOXN1O15353 648 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 F13A1P00488 732 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 GNRH1P01148 92 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 MMP1P03956 469 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 HOXC6P09630 235 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 FCER1AP12319 257 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 CCND1P24385 295 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 GNA11P29992 359 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 RPS6P62753 249 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 CEBPZQ03701 1054 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 TUBB2AQ13885 445 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 KCTD2Q14681 263 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 SPRED3Q2MJR0 410 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 BOLA3Q53S33 107 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 TCERG1LQ5VWI1 586 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 KRT40Q6A162 431 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 RNF207Q6ZRF8 634 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 GRAMD2AQ8IUY3 354 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 FAM133AQ8N9E0 248 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 CD99L2Q8TCZ2 262 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 SOCS4Q8WXH5 440 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 P3H4Q92791 437 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 C8orf76Q96K31 380 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 MMP19Q99542 508 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 TUBB2BQ9BVA1 445 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 ARHGAP39Q9C0H5 1083 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 NDST4Q9H3R1 872 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 CLSTN2Q9H4D0 955 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 PSTPIP2Q9H939 334 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 C6orf50Q9HD87 102 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 GJB4Q9NTQ9 266 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 ATAD3AQ9NVI7 634 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 PCDHA4Q9UN74 947 aa10.33□□□□□ -0.76
PDLIM5-207ENST00000503974 POTEFA5A3E0 1075 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 FAM25EA8MYX2 175 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 TNPO2O14787 897 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 FOXD2O60548 495 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 CALML3P27482 149 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 HALP42357 657 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ADCY7P51828 1080 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 BYSLQ13895 437 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 KIF22Q14807 665 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 RASA2Q15283 850 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ANKRD20A2Q5SQ80 823 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ANKRD20A1Q5TYW2 823 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ANKRD20A3Q5VUR7 823 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 OR52E8Q6IFG1 317 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ZNF662Q6ZS27 426 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ZNF365Q70YC5 407 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 CCAR1Q8IX12 1150 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 SYTL5Q8TDW5 730 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 CENPTQ96BT3 561 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 CCT8L2Q96SF2 557 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ZSWIM4Q9H7M6 989 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 DDX19AQ9NUU7 478 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 COL20A1Q9P218 1284 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ASTN1O14525 1302 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 RPTORQ8N122 1335 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 GCOM1H8Y6P7 765 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ADAMTS3O15072 1205 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 HNRNPRO43390 633 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 TACC1O75410 805 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 CFBP00751 764 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 IGHA2P01877 340 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 POLR2MP0CAP2 368 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 PDCP20941 246 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 S100A1P23297 94 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ADORA2AP29274 412 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 S100A5P33763 92 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 TUFMP49411 452 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 MSLNQ13421 630 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 BAATQ14032 418 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ZNF792Q3KQV3 632 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 SPECC1Q5M775 1068 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 RNF220Q5VTB9 566 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 NSMFQ6X4W1 530 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 C3orf62Q6ZUJ4 267 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 OSTM1Q86WC4 334 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 SAMD14Q8IZD0 417 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 BLIDQ8IZY5 108 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 ANKRD35Q8N283 1001 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 TNFRSF25Q93038 417 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 RMND1Q9NWS8 449 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 HSFX1Q9UBD0 423 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 CDC23Q9UJX2 597 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 TMCC3Q9ULS5 477 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 KCNJ14Q9UNX9 436 aa10.32□□□□□ -0.76
PDLIM5-207ENST00000503974 SGTAO43765 313 aa10.31□□□□□ -0.76
PDLIM5-207ENST00000503974 CLASP2O75122 1294 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-207ENST00000503974 COBLO75128 1261 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms