RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 CBFA2T3O75081 653 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DCTN3O75935 186 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ASMTLO95671 621 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZBED1O96006 694 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 APBA3O96018 575 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MMP1P03956 469 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CYP1A1P04798 512 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 ALDH2P05091 517 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 EIF2S1P05198 315 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 SPATA31D3P0C874 917 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PYGMP11217 842 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 TRIM21P19474 475 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 RASA1P20936 1047 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SERPINB3P29508 390 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 HOXA10P31260 410 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 HOXA7P31268 230 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 MATR3P43243 847 aaKnown RBP eCLIP2.92□□□□□ -1.94
MDC1-208ENST00000494654 METAP2P50579 478 aaKnown RBP eCLIP2.92□□□□□ -1.94
MDC1-208ENST00000494654 RASSF2P50749 326 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CCT8P50990 548 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 RCAN1P53805 252 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 YARSP54577 528 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 EPHA4P54764 986 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 STX17P56962 302 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ANTXR2P58335 489 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 RTP1P59025 263 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MCCD1P59942 119 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 ARPC4P59998 168 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZC3H6P61129 1189 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 PSMC1P62191 440 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 TUBA4AP68366 448 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 XIAPP98170 497 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DSG1Q02413 1049 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 RASSF7Q02833 373 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MGAT5Q09328 741 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NEXNQ0ZGT2 675 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 AP1B1Q10567 949 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DCTN2Q13561 401 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 CYLC2Q14093 348 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 GRM2Q14416 872 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 KRT72Q14CN4 511 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CCDC6Q16204 474 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CNGA2Q16280 664 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PPP2R5EQ16537 467 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 EML3Q32P44 896 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PDCD4Q53EL6 469 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 SLC44A4Q53GD3 710 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 COBLL1Q53SF7 1204 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ODF2Q5BJF6 829 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FKBP15Q5T1M5 1219 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 GJC2Q5T442 439 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 SYCP2LQ5T4T6 812 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MEI1Q5TIA1 1274 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DENND2CQ68D51 928 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CGB2Q6NT52 195 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NEPROQ6NW34 567 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DUS1LQ6P1R4 473 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 SPATA31D4Q6ZUB0 917 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NANOGNBQ7Z5D8 188 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PATL1Q86TB9 770 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 NME9Q86XW9 330 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CROCCP3Q8IVE0 287 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MAP7D3Q8IWC1 876 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZSCAN29Q8IWY8 852 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 EXOC8Q8IYI6 725 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 GRAMD1CQ8IYS0 662 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZNF295-AS1Q8N0V1 137 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NUP93Q8N1F7 819 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 STAG2Q8N3U4 1231 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 RASGEF1CQ8N431 466 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 KIF2BQ8N4N8 673 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FITM2Q8N6M3 262 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 USHBP1Q8N6Y0 703 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SCAIQ8N9R8 606 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 SUPT20HQ8NEM7 779 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 OR2W6PQ8NHA6 318 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NCOA7Q8NI08 942 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PPP1R14CQ8TAE6 165 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FNDC8Q8TC99 324 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 ZNF398Q8TD17 642 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 DQX1Q8TE96 717 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 SCFD2Q8WU76 684 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.92□□□□□ -1.94
MDC1-208ENST00000494654 WDR60Q8WVS4 1066 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CKAP2Q8WWK9 683 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NELFBQ8WX92 580 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CTNNBL1Q8WYA6 563 aaPredicted RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 CASP10Q92851 521 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MTMR8Q96EF0 704 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PAGE5Q96GU1 130 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MPP4Q96JB8 637 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 MAGEB18Q96M61 343 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 CCDC42Q96M95 316 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 NUDCD1Q96RS6 583 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 FMO2Q99518 471 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 PRMT1Q99873 361 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 ELAC2Q9BQ52 826 aaKnown RBP2.92□□□□□ -1.94
MDC1-208ENST00000494654 CDK19Q9BWU1 502 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 EDEM3Q9BZQ6 932 aa2.92□□□□□ -1.94
MDC1-208ENST00000494654 GRIP2Q9C0E4 1043 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms