RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SP140Q13342 867 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 TOB2Q14106 344 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-216ENST00000493758 RRP1BQ14684 758 aaKnown RBP5.84□□□□□ -1.47
ITGB1-216ENST00000493758 FAM214AQ32MH5 1076 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 USP39Q53GS9 565 aaKnown RBP5.84□□□□□ -1.47
ITGB1-216ENST00000493758 Q6ZRM9 215 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 SPRED1Q7Z699 444 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 FAM83AQ86UY5 434 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 TRMT2AQ8IZ69 625 aaKnown RBP5.84□□□□□ -1.47
ITGB1-216ENST00000493758 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
ITGB1-216ENST00000493758 CASKIN2Q8WXE0 1202 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 CPEB1Q9BZB8 566 aaKnown RBP5.84□□□□□ -1.47
ITGB1-216ENST00000493758 ASPSCR1Q9BZE9 553 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 ATRNL1Q5VV63 1379 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 TRIM24O15164 1050 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 OSMP13725 252 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 SCNN1GP51170 649 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 PRAMEF14Q5SWL7 426 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 ELOA2Q8IYF1 753 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-216ENST00000493758 ADI1Q9BV57 179 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 ZNF747Q9BV97 191 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 GPR87Q9BY21 358 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 FAM30AQ9NZY2 134 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 ZBTB21Q9ULJ3 1066 aa5.83□□□□□ -1.48
ITGB1-216ENST00000493758 WASHC2CQ9Y4E1 1318 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 PLSCR1O15162 318 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 AKR1B10O60218 316 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 KATNA1O75449 491 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 ALOX15P16050 662 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-216ENST00000493758 TACR2P21452 398 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 IBSPP21815 317 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-216ENST00000493758 SREBF1P36956 1147 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 APBA1Q02410 837 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 CRHR2Q13324 411 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 FOXE3Q13461 319 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 PUM1Q14671 1186 aaKnown RBP eCLIP5.82□□□□□ -1.48
ITGB1-216ENST00000493758 VPS72Q15906 364 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 ABCB5Q2M3G0 1257 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 C1orf210Q8IVY1 113 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.82□□□□□ -1.48
ITGB1-216ENST00000493758 ATXN2LQ8WWM7 1075 aaKnown RBP5.82□□□□□ -1.48
ITGB1-216ENST00000493758 EXTL1Q92935 676 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 MTMR8Q96EF0 704 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 CYFIP2Q96F07 1278 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 FAXDC2Q96IV6 333 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 MNTQ99583 582 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 KCNH6Q9H252 994 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 DMRT3Q9NQL9 472 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 PARPBPQ9NWS1 579 aa5.82□□□□□ -1.48
ITGB1-216ENST00000493758 XDHP47989 1333 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 ADCY6O43306 1168 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 ITKQ08881 620 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 CNGB1Q14028 1251 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-216ENST00000493758 FAM47AQ5JRC9 791 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 GSPT2Q8IYD1 628 aaKnown RBP5.81□□□□□ -1.48
ITGB1-216ENST00000493758 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.81□□□□□ -1.48
ITGB1-216ENST00000493758 JADE3Q92613 823 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 CEP95Q96GE4 821 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 FUBP3Q96I24 572 aaKnown RBP eCLIP5.81□□□□□ -1.48
ITGB1-216ENST00000493758 LANCL2Q9NS86 450 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 HOMER2Q9NSB8 354 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 MKS1Q9NXB0 559 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 TUBD1Q9UJT1 453 aa5.81□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA12O60330 932 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 NCLP19338 710 aaKnown RBP5.8□□□□□ -1.48
ITGB1-216ENST00000493758 MGAT1P26572 445 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 SLC6A9P48067 706 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 CCT2P78371 535 aaKnown RBP5.8□□□□□ -1.48
ITGB1-216ENST00000493758 EXOSC10Q01780 885 aaKnown RBP5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PTH1RQ03431 593 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 SEPT2Q15019 361 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 BMT2Q1RMZ1 405 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 NRN1LQ496H8 165 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 MFSD14BQ5SR56 506 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 TMEM240Q5SV17 173 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 MB21D1Q8N884 522 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 CPPED1Q9BRF8 314 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-216ENST00000493758 VPS11Q9H270 941 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 SIK3Q9Y2K2 1263 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA9Q9Y5G4 932 aaKnown RBP5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA8Q9Y5G5 932 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA7Q9Y5G6 932 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA6Q9Y5G7 932 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA3Q9Y5H0 932 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 PCDHGA2Q9Y5H1 932 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 MRFAP1Q9Y605 127 aa5.8□□□□□ -1.48
ITGB1-216ENST00000493758 KLHL33A6NCF5 533 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 TBKBP1A7MCY6 615 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 PRR5-ARHGAP8B1AHC4 643 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 DIRC3C9JPN6 131 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 TEX33O43247 280 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 SGTAO43765 313 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 NDUFS2O75306 463 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 MT-CO1P00395 513 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 SNRPA1P09661 255 aaKnown RBP5.79□□□□□ -1.48
ITGB1-216ENST00000493758 MYBL2P10244 700 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 HSP90B1P14625 803 aaKnown RBP5.79□□□□□ -1.48
ITGB1-216ENST00000493758 IL2RBP14784 551 aa5.79□□□□□ -1.48
ITGB1-216ENST00000493758 ADKP55263 362 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms