RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	PSPC1	Q8WXF1	523 aa	Known RBP	21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	NELL1	Q92832	810 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	CHAMP1	Q96JM3	812 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	B3GALT6	Q96L58	329 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ESYT1	Q9BSJ8	1104 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	FAM126A	Q9BYI3	521 aa	Predicted RBP	21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	MINDY3	Q9H8M7	445 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	LTB4R2	Q9NPC1	389 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	ANO2	Q9NQ90	1003 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	GMEB2	Q9UKD1	530 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	IPP	Q9Y573	584 aa		21.52	■■□□□ 1.04
CDK5RAP2-218	ENST00000491334	MTCL1	Q9Y4B5	1905 aa	Known RBP	21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	ASAP2	O43150	1006 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	ADRB1	P08588	477 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	HNRNPA1	P09651	372 aa	Known RBP eCLIP	21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334		Q4G0T1	1027 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	FUT10	Q6P4F1	479 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CCDC148	Q8NFR7	591 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	FGF13	Q92913	245 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CLDN23	Q96B33	292 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	MBOAT7	Q96N66	472 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	GPR62	Q9BZJ7	368 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	MIOS	Q9NXC5	875 aa		21.51	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	DKC1	O60832	514 aa	Known RBP eCLIP	21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	ERLIN2	O94905	339 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	RPL17	P18621	184 aa	Known RBP	21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CD72	P21854	359 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TGM1	P22735	817 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	AXL	P30530	894 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	MLH1	P40692	756 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	SCNN1G	P51170	649 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	FGD1	P98174	961 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	LAMTOR4	Q0VGL1	99 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PCBP1	Q15365	356 aa	Known RBP eCLIP	21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	B3GNT9	Q6UX72	402 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	RNF39	Q9H2S5	420 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	ADAM28	Q9UKQ2	775 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	GIT1	Q9Y2X7	761 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PPME1	Q9Y570	386 aa		21.5	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	MIA3	Q5JRA6	1907 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334		F8W810	466 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TADA2A	O75478	443 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	RPS9	P46781	194 aa	Known RBP	21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PPM1L	Q5SGD2	360 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	LIN9	Q5TKA1	542 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PLA2G4F	Q68DD2	849 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	HACE1	Q8IYU2	909 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TMEM143	Q96AN5	459 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CCDC51	Q96ER9	411 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CEP170P1	Q96L14	293 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	ZFP42	Q96MM3	310 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PHF20	Q9BVI0	1012 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	C22orf23	Q9BZE7	217 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	RAB23	Q9ULC3	237 aa		21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	MRPS17	Q9Y2R5	130 aa	Known RBP	21.49	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	XYLB	O75191	536 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	RFC5	P40937	340 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	NPEPPS	P55786	919 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	NTHL1	P78549	312 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	NOTUM	Q6P988	496 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	RNF149	Q8NC42	400 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TBCK	Q8TEA7	893 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TCP11	Q8WWU5	503 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	EIF2A	Q9BY44	585 aa	Known RBP	21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	DHX33	Q9H6R0	707 aa	Known RBP	21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	POLI	Q9UNA4	740 aa		21.48	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CYP3A7-CYP3A51P	A0A087WV96	503 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	HMGB1	P09429	215 aa	Known RBP	21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CYP3A7	P24462	503 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	HOXA9	P31269	272 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	QARS	P47897	775 aa	Known RBP	21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	NRL	P54845	237 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TSGA10IP	Q3SY00	556 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TSSK4	Q6SA08	328 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	ZNF852	Q6ZMS4	543 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CSRNP2	Q9H175	543 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	FBXW11	Q9UKB1	542 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	HES2	Q9Y543	173 aa		21.47	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TARS	P26639	723 aa	Known RBP	21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	KRT32	Q14532	448 aa		21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PRSS55	Q6UWB4	352 aa	Predicted RBP	21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TPRG1	Q6ZUI0	275 aa		21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	KXD1	Q9BQD3	176 aa		21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	APOL6	Q9BWW8	343 aa		21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	TRIM6	Q9C030	488 aa	Predicted RBP	21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	PARD6A	Q9NPB6	346 aa		21.46	■■□□□ 1.03
CDK5RAP2-218	ENST00000491334	CFAP47	Q6ZTR5	3102 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	CCL16	O15467	120 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	C8A	P07357	584 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	NLRP5	P59047	1200 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ADCY1	Q08828	1119 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PPP2R5D	Q14738	602 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ADCK5	Q3MIX3	580 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PPM1J	Q5JR12	505 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	FERMT3	Q86UX7	667 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	CELF5	Q8N6W0	485 aa	Known RBP	21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ZNF579	Q8NAF0	562 aa	Known RBP	21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ITFG1	Q8TB96	612 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	NETO1	Q8TDF5	533 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PRMT8	Q9NR22	394 aa	Predicted RBP	21.45	■■□□□ 1.02

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms