RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 FUCA1P04066 466 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 CAPNS1P04632 268 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 CCND3P30281 292 aaPredicted RBP5.61□□□□□ -1.51
CNN3-206ENST00000487539 CACNB3P54284 484 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 SLC9A5Q14940 896 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 SF1Q15637 639 aaKnown RBP5.61□□□□□ -1.51
CNN3-206ENST00000487539 MTERF2Q49AM1 385 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 AKNAD1Q5T1N1 836 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 MBLAC2Q68D91 279 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 WWC2Q6AWC2 1192 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 TMEM145Q8NBT3 493 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 KREMEN2Q8NCW0 462 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 MYO3BQ8WXR4 1341 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 DDX1Q92499 740 aaKnown RBP5.61□□□□□ -1.51
CNN3-206ENST00000487539 TRIB2Q92519 343 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 TRIM43Q96BQ3 446 aaPredicted RBP5.61□□□□□ -1.51
CNN3-206ENST00000487539 C8orf49Q96NF6 230 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 WRNIP1Q96S55 665 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 IER2Q9BTL4 223 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 C1QTNF3Q9BXJ4 246 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 SENP6Q9GZR1 1112 aaPredicted RBP5.61□□□□□ -1.51
CNN3-206ENST00000487539 COA1Q9GZY4 146 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 MARCH2Q9P0N8 246 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 BAHCC1Q9P281 2608 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 MED23Q9ULK4 1368 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 DUSP10Q9Y6W6 482 aa5.61□□□□□ -1.51
CNN3-206ENST00000487539 AK9Q5TCS8 1911 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 PLXNB2O15031 1838 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 PI4K2BG5E9Z4 385 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 HMGCRP04035 888 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 FGFR1P11362 822 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 CAPN2P17655 700 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 PFKLP17858 780 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 CCT4P50991 539 aaKnown RBP5.6□□□□□ -1.51
CNN3-206ENST00000487539 RBM5P52756 815 aaKnown RBP eCLIP5.6□□□□□ -1.51
CNN3-206ENST00000487539 CNGB1Q14028 1251 aaPredicted RBP5.6□□□□□ -1.51
CNN3-206ENST00000487539 TARBP2Q15633 366 aaKnown RBP5.6□□□□□ -1.51
CNN3-206ENST00000487539 INF2Q27J81 1249 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 PRSS53Q2L4Q9 553 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 SLC35F1Q5T1Q4 408 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 MIGA2Q7L4E1 593 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 DPH6Q7L8W6 267 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 DCP2Q8IU60 420 aaKnown RBP5.6□□□□□ -1.51
CNN3-206ENST00000487539 ADGRG2Q8IZP9 1017 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 RTF1Q92541 710 aaKnown RBP5.6□□□□□ -1.51
CNN3-206ENST00000487539 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
CNN3-206ENST00000487539 PLXNA1Q9UIW2 1896 aa5.6□□□□□ -1.51
CNN3-206ENST00000487539 BUB1BO60566 1050 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 PPP1R11O60927 126 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 CYP2B6P20813 491 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 GRIA2P42262 883 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 NCKAP1LP55160 1127 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 PRR5P85299 388 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 ZNF200P98182 395 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 IFRD2Q12894 506 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 SERINC3Q13530 473 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 KRT24Q2M2I5 525 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 HSP90AB3PQ58FF7 597 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 MAP3K21Q5TCX8 1036 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 MROH9Q5TGP6 573 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 RSPO2Q6UXX9 243 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 SPRED1Q7Z699 444 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 CCDC103Q8IW40 242 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 Q8N1Y9 231 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 ANKRD13CQ8N6S4 541 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 RCBTB1Q8NDN9 531 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 PLEKHO2Q8TD55 490 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 MKL1Q969V6 931 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 TIFAQ96CG3 184 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 TSPAN17Q96FV3 270 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 TRMT2BQ96GJ1 504 aaKnown RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 C1orf159Q96HA4 380 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 RNPC3Q96LT9 517 aaKnown RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 RBM15Q96T37 977 aaKnown RBP eCLIP5.59□□□□□ -1.51
CNN3-206ENST00000487539 SPATA9Q9BWV2 254 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 RNF38Q9H0F5 515 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 AP5M1Q9H0R1 490 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 CD209Q9NNX6 404 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 ARHGEF4Q9NR80 690 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 TMEFF2Q9UIK5 374 aaPredicted RBP5.59□□□□□ -1.51
CNN3-206ENST00000487539 ATP11BQ9Y2G3 1177 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 SPEF2Q9C093 1822 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 MAST2Q6P0Q8 1798 aa5.59□□□□□ -1.51
CNN3-206ENST00000487539 PRRC2BQ5JSZ5 2229 aaKnown RBP5.59□□□□□ -1.52
CNN3-206ENST00000487539 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 A0A1B0GTL3 188 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 C22orf46C9J442 243 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 H7BY64 318 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 PRODHO43272 600 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 DLX3O60479 287 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 NTRK1P04629 796 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 PABPC1P11940 636 aaKnown RBP5.58□□□□□ -1.52
CNN3-206ENST00000487539 CNR2P34972 360 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 PPATQ06203 517 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
CNN3-206ENST00000487539 LSAMPQ13449 338 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 CCL14Q16627 93 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms