RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 TCHPQ9BT92 498 aa13.89□□□□□ -0.19
HDAC7-223ENST00000485796 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
HDAC7-223ENST00000485796 GZF1Q9H116 711 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-223ENST00000485796 PCIF1Q9H4Z3 704 aa13.89□□□□□ -0.19
HDAC7-223ENST00000485796 SNTG2Q9NY99 539 aa13.89□□□□□ -0.19
HDAC7-223ENST00000485796 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-223ENST00000485796 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
HDAC7-223ENST00000485796 TTC3P53804 2025 aa13.89□□□□□ -0.19
HDAC7-223ENST00000485796 LAMA3Q16787 3333 aa13.89□□□□□ -0.19
HDAC7-223ENST00000485796 PTPRSQ13332 1948 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 A0A0B4J269 797 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 SYCE3A1L190 88 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 GOLGA8IPA6NC78 632 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 GOLGA8JA6NMD2 632 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 FAM189A1O60320 539 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 ZNF623O75123 536 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 MYOGP15173 224 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 SCP2P22307 547 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 TNFSF9P41273 254 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 RABGGTBP53611 331 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 NLRP12P59046 1061 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 MCL1Q07820 350 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
HDAC7-223ENST00000485796 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
HDAC7-223ENST00000485796 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 THNSL1Q8IYQ7 743 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 TMEM130Q8N3G9 435 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
HDAC7-223ENST00000485796 TOP1MTQ969P6 601 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 SAAL1Q96ER3 474 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 MED15Q96RN5 788 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 TRAIPQ9BWF2 469 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 AGPAT3Q9NRZ7 376 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 C1orf112Q9NSG2 853 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 KLK14Q9P0G3 267 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 EXOC7Q9UPT5 735 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 SLC4A7Q9Y6M7 1214 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 UBE4BO95155 1302 aa13.88□□□□□ -0.19
HDAC7-223ENST00000485796 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 CLDN3O15551 220 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 KIF20AO95235 890 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 AMHP03971 560 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 MCF2P10911 925 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 MATR3P43243 847 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC7-223ENST00000485796 KCNJ6P48051 423 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 WNT7BP56706 349 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 STIM1Q13586 685 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC7-223ENST00000485796 DPCR1Q3MIW9 517 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 KLHL10Q6JEL2 608 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
HDAC7-223ENST00000485796 HERC6Q8IVU3 1022 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 FAM84AQ96KN4 292 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 MSTO1Q9BUK6 570 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 MIOSQ9NXC5 875 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 HCSTQ9UBK5 93 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
HDAC7-223ENST00000485796 COL4A6Q14031 1691 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 OFD1O75665 1012 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 ARHGEF15O94989 841 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 ATP2A2P16615 1042 aaKnown RBP13.86□□□□□ -0.19
HDAC7-223ENST00000485796 PBX2P40425 430 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 ACOT2P49753 483 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 CYP2J2P51589 502 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 STX17P56962 302 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 TYRO3Q06418 890 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 STX1AQ16623 288 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 DCAF4L1Q3SXM0 396 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 ZCWPW2Q504Y3 356 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 COBLL1Q53SF7 1204 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 NPAS4Q8IUM7 802 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 TDHQ8IZJ6 230 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 EEF2KMTQ96G04 330 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 ZFP42Q96MM3 310 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 TRIM6Q9C030 488 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-223ENST00000485796 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
HDAC7-223ENST00000485796 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 PARP2Q9UGN5 583 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 AGO2Q9UKV8 859 aaKnown RBP13.86□□□□□ -0.19
HDAC7-223ENST00000485796 CTNND2Q9UQB3 1225 aa13.86□□□□□ -0.19
HDAC7-223ENST00000485796 LAMA2P24043 3122 aaKnown RBP13.86□□□□□ -0.19
HDAC7-223ENST00000485796 LCHNA4D1U4 455 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 B4GALT3O60512 393 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 EFCAB14O75071 495 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 DGKIO75912 1065 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 RECQL4O94761 1208 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 GJB5O95377 273 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 ITGA4P13612 1032 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 GRM5P41594 1212 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 RAB27AP51159 221 aa13.85□□□□□ -0.19
HDAC7-223ENST00000485796 PAN2Q504Q3 1202 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms