RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 MYLIPQ8WY64 445 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
RPP40-206ENST00000483546 LMAN2LQ9H0V9 348 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 NXF3Q9H4D5 531 aaKnown RBP17.12■□□□□ 0.33
RPP40-206ENST00000483546 CWH43Q9H720 699 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 MRPL44Q9H9J2 332 aaKnown RBP17.12■□□□□ 0.33
RPP40-206ENST00000483546 CERS4Q9HA82 394 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 GDPD2Q9HCC8 539 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 TYW1Q9NV66 732 aaKnown RBP17.12■□□□□ 0.33
RPP40-206ENST00000483546 MTUS1Q9ULD2 1270 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 CITO14578 2027 aa17.12■□□□□ 0.33
RPP40-206ENST00000483546 PVALEFA0A1B0GWK0 134 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 ACTN4O43707 911 aaKnown RBP17.11■□□□□ 0.33
RPP40-206ENST00000483546 ASIC1P78348 528 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 KYAT1Q16773 422 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 PTPROQ16827 1216 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 CDR2LQ86X02 465 aaPredicted RBP17.11■□□□□ 0.33
RPP40-206ENST00000483546 MAP4K3Q8IVH8 894 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 BICD1Q96G01 975 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 TBC1D13Q9NVG8 400 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
RPP40-206ENST00000483546 ARL5CA6NH57 179 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 HNRNPDLO14979 420 aaKnown RBP17.1■□□□□ 0.33
RPP40-206ENST00000483546 CLDN3O15551 220 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 LPXNO60711 386 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 PPP1R37O75864 691 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
RPP40-206ENST00000483546 GRM5P41594 1212 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 LIG4P49917 911 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 NDUFA8P51970 172 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 UBE3AQ05086 875 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
RPP40-206ENST00000483546 GPM6BQ13491 265 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 SPRED2Q7Z698 418 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 COLGALT1Q8NBJ5 622 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 STAMQ92783 540 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 ZNF558Q96NG5 402 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
RPP40-206ENST00000483546 STRA6Q9BX79 667 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 CDT1Q9H211 546 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 SERTAD1Q9UHV2 236 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 INPP5FQ9Y2H2 1132 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 HES2Q9Y543 173 aa17.1■□□□□ 0.33
RPP40-206ENST00000483546 TRANK1O15050 2925 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 ABLIM1O14639 778 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 SLC34A2O95436 690 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 MLH1P40692 756 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
RPP40-206ENST00000483546 MCL1Q07820 350 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 COASYQ13057 564 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPP40-206ENST00000483546 LONRF3Q496Y0 759 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 PAGE5Q96GU1 130 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 IPO9Q96P70 1041 aaKnown RBP17.09■□□□□ 0.33
RPP40-206ENST00000483546 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
RPP40-206ENST00000483546 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 GAD1Q99259 594 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 TOPORSQ9NS56 1045 aaPredicted RBP17.09■□□□□ 0.33
RPP40-206ENST00000483546 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
RPP40-206ENST00000483546 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
RPP40-206ENST00000483546 PLXNA4Q9HCM2 1894 aa17.08■□□□□ 0.33
RPP40-206ENST00000483546 RECQL4O94761 1208 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 GCNT3O95395 438 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 AFMP43652 599 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.32
RPP40-206ENST00000483546 PLCB3Q01970 1234 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 GRIK3Q13003 919 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 ADGRE1Q14246 886 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
RPP40-206ENST00000483546 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 GDPD5Q8WTR4 605 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 MRPL38Q96DV4 380 aaKnown RBP17.08■□□□□ 0.32
RPP40-206ENST00000483546 ACCSQ96QU6 501 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 TMEM206Q9H813 350 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 STK39Q9UEW8 545 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 LZTS1Q9Y250 596 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 USP20Q9Y2K6 914 aa17.08■□□□□ 0.32
RPP40-206ENST00000483546 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.32
RPP40-206ENST00000483546 UBE4BO95155 1302 aa17.07■□□□□ 0.32
RPP40-206ENST00000483546 RFXAPO00287 272 aa17.07■□□□□ 0.32
RPP40-206ENST00000483546 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPP40-206ENST00000483546 NR1I2O75469 434 aa17.07■□□□□ 0.32
RPP40-206ENST00000483546 ZNF202O95125 648 aa17.07■□□□□ 0.32
RPP40-206ENST00000483546 IGFBP4P22692 258 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms