RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 F8W810 466 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 LRP3O75074 770 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDAC6-224ENST00000481929 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
HDAC6-224ENST00000481929 KCNA4P22459 653 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 MLH1P40692 756 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 LPAL2Q16609 132 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 PFKFB3Q16875 520 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-224ENST00000481929 LIN9Q5TKA1 542 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 FUT10Q6P4F1 479 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-224ENST00000481929 KXD1Q9BQD3 176 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
HDAC6-224ENST00000481929 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 DDX11L8A8MPP1 907 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 ADAMTS3O15072 1205 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 STBD1O95210 358 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 HOXA11P31270 313 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-224ENST00000481929 SCNN1GP51170 649 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 NRLP54845 237 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 ZNF852Q6ZMS4 543 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 SMG8Q8ND04 991 aaKnown RBP16.73■□□□□ 0.27
HDAC6-224ENST00000481929 SLC5A5Q92911 643 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 GAD1Q99259 594 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 GPR62Q9BZJ7 368 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 FBXW11Q9UKB1 542 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 DOCK6Q96HP0 2047 aa16.73■□□□□ 0.27
HDAC6-224ENST00000481929 XYLBO75191 536 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 RETP07949 1114 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 GNA11P29992 359 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 MTAPQ13126 283 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 PPP2R5DQ14738 602 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 PPM1LQ5SGD2 360 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 CELF5Q8N6W0 485 aaKnown RBP16.72■□□□□ 0.27
HDAC6-224ENST00000481929 MINDY3Q9H8M7 445 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 RALYQ9UKM9 306 aaKnown RBP16.72■□□□□ 0.27
HDAC6-224ENST00000481929 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 POLIQ9UNA4 740 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 IPPQ9Y573 584 aa16.72■□□□□ 0.27
HDAC6-224ENST00000481929 CEP295Q9C0D2 2601 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 C8AP07357 584 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 SRGAP2CP0DJJ0 459 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 HOXA9P31269 272 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 ADCY1Q08828 1119 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 PRR23BQ6ZRT6 265 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 ITFG1Q8TB96 612 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 BICD2Q8TD16 824 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 SLC7A3Q8WY07 619 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 DDX1Q92499 740 aaKnown RBP16.71■□□□□ 0.27
HDAC6-224ENST00000481929 GJA10Q969M2 543 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 ZFP42Q96MM3 310 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
HDAC6-224ENST00000481929 CCL16O15467 120 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 PSMD10O75832 226 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 ERLIN2O94905 339 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 TDGF1P13385 188 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 CDC27P30260 824 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 COL9A2Q14055 689 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-224ENST00000481929 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-224ENST00000481929 PRR23CQ6ZRP0 262 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 ANO5Q75V66 913 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 PSPC1Q8WXF1 523 aaKnown RBP16.7■□□□□ 0.26
HDAC6-224ENST00000481929 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
HDAC6-224ENST00000481929 LSG1Q9H089 658 aaKnown RBP16.7■□□□□ 0.26
HDAC6-224ENST00000481929 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 HEBP1Q9NRV9 189 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 HES2Q9Y543 173 aa16.7■□□□□ 0.26
HDAC6-224ENST00000481929 TDRD15B5MCY1 1934 aaKnown RBP16.69■□□□□ 0.26
HDAC6-224ENST00000481929 KLF18A0A0U1RQI7 1052 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 USP11P51784 963 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 FZD5Q13467 585 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 NOTUMQ6P988 496 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 NPAS3Q8IXF0 933 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 PRPF31Q8WWY3 499 aaKnown RBP16.69■□□□□ 0.26
HDAC6-224ENST00000481929 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 IER2Q9BTL4 223 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 APOL6Q9BWW8 343 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 CHRDQ9H2X0 955 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 KCNH3Q9ULD8 1083 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 NAP1L2Q9ULW6 460 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-224ENST00000481929 GIT1Q9Y2X7 761 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 F5P12259 2224 aa16.69■□□□□ 0.26
HDAC6-224ENST00000481929 SF3B1O75533 1304 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC6-224ENST00000481929 FOXD2O60548 495 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-224ENST00000481929 TADA2AO75478 443 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 ECI2O75521 394 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 AXLP30530 894 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 PSMC5P62195 406 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 NCBP1Q09161 790 aaKnown RBP16.68■□□□□ 0.26
HDAC6-224ENST00000481929 LAMTOR4Q0VGL1 99 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 CSRP2Q16527 193 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 PABPC1LQ4VXU2 614 aaKnown RBP16.68■□□□□ 0.26
HDAC6-224ENST00000481929 RTP2Q5QGT7 225 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms