RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 MAGEA9P43362 315 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 B3GNT9Q6UX72 402 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 MTSS1LQ765P7 747 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 SRGAP1Q7Z6B7 1085 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 CCDC12Q8WUD4 166 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-212ENST00000479586 FGF13Q92913 245 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 MBOAT7Q96N66 472 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 KXD1Q9BQD3 176 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 EIF2AQ9BY44 585 aaKnown RBP19.4■□□□□ 0.7
HMGN1-212ENST00000479586 UBN1Q9NPG3 1134 aa19.4■□□□□ 0.7
HMGN1-212ENST00000479586 NAP1L2Q9ULW6 460 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-212ENST00000479586 TDRD15B5MCY1 1934 aaKnown RBP19.4■□□□□ 0.7
HMGN1-212ENST00000479586 TBC1D4O60343 1298 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 TARSP26639 723 aaKnown RBP19.39■□□□□ 0.69
HMGN1-212ENST00000479586 NPEPPSP55786 919 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 USP41Q3LFD5 358 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 ZBTB41Q5SVQ8 909 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 RSPO2Q6UXX9 243 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-212ENST00000479586 ZNF579Q8NAF0 562 aaKnown RBP19.39■□□□□ 0.69
HMGN1-212ENST00000479586 PRPF31Q8WWY3 499 aaKnown RBP19.39■□□□□ 0.69
HMGN1-212ENST00000479586 RABGGTAQ92696 567 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 TMEM143Q96AN5 459 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 CLDN23Q96B33 292 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 JPH2Q9BR39 696 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-212ENST00000479586 ESYT1Q9BSJ8 1104 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 COLEC11Q9BWP8 271 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 PRMT8Q9NR22 394 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-212ENST00000479586 GMEB2Q9UKD1 530 aa19.39■□□□□ 0.69
HMGN1-212ENST00000479586 PPM1JQ5JR12 505 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 PRSS55Q6UWB4 352 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-212ENST00000479586 TPRG1Q6ZUI0 275 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 DHX32Q7L7V1 743 aaKnown RBP19.38■□□□□ 0.69
HMGN1-212ENST00000479586 CNNM3Q8NE01 707 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 ITFG1Q8TB96 612 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 CHAMP1Q96JM3 812 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 APOL6Q9BWW8 343 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 FBXW11Q9UKB1 542 aa19.38■□□□□ 0.69
HMGN1-212ENST00000479586 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.38■□□□□ 0.69
HMGN1-212ENST00000479586 NR1I2O75469 434 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 USP11P51784 963 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 PFKPQ01813 784 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 SPEM2Q0P670 501 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 LAMTOR4Q0VGL1 99 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 LPAL2Q16609 132 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 GPR65Q8IYL9 337 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 BICD2Q8TD16 824 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
HMGN1-212ENST00000479586 SLC7A3Q8WY07 619 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 PHF20Q9BVI0 1012 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 BMP2KQ9NSY1 1161 aaPredicted RBP19.37■□□□□ 0.69
HMGN1-212ENST00000479586 CACNG4Q9UBN1 327 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 ADAM28Q9UKQ2 775 aa19.37■□□□□ 0.69
HMGN1-212ENST00000479586 CCL16O15467 120 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 TDP2O95551 362 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 RCAN1P53805 252 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 PSMC5P62195 406 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 CREMQ03060 361 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 ADCK5Q3MIX3 580 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 RTP2Q5QGT7 225 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 PPM1LQ5SGD2 360 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 CPB2Q96IY4 423 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 RALYQ9UKM9 306 aaKnown RBP19.36■□□□□ 0.69
HMGN1-212ENST00000479586 POLIQ9UNA4 740 aa19.36■□□□□ 0.69
HMGN1-212ENST00000479586 ATRXP46100 2492 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 SLC30A4O14863 429 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 PRPF3O43395 683 aaKnown RBP19.35■□□□□ 0.69
HMGN1-212ENST00000479586 TSPAN1O60635 241 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 ERLIN2O94905 339 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 C8AP07357 584 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 HNRNPA1P09651 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGN1-212ENST00000479586 RPS9P46781 194 aaKnown RBP19.35■□□□□ 0.69
HMGN1-212ENST00000479586 MTAPQ13126 283 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 FZD5Q13467 585 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 Q4G0T1 1027 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 LIN9Q5TKA1 542 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 RNF149Q8NC42 400 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 GSTCDQ8NEC7 633 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 TBCKQ8TEA7 893 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 NXF3Q9H4D5 531 aaKnown RBP19.35■□□□□ 0.69
HMGN1-212ENST00000479586 DHX33Q9H6R0 707 aaKnown RBP19.35■□□□□ 0.69
HMGN1-212ENST00000479586 VPS54Q9P1Q0 977 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 NOTCH4Q99466 2003 aa19.35■□□□□ 0.69
HMGN1-212ENST00000479586 CNOT1A5YKK6 2376 aaKnown RBP19.34■□□□□ 0.69
HMGN1-212ENST00000479586 SHISA7A6NL88 538 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 EML1O00423 815 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 TDGF1P13385 188 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 NPAS3Q8IXF0 933 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 ETNPPLQ8TBG4 499 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 NETO1Q8TDF5 533 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 ING5Q8WYH8 240 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 CEP170P1Q96L14 293 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 NELL2Q99435 816 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 CLSTN3Q9BQT9 956 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 HEBP1Q9NRV9 189 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 HCFC1R1Q9NWW0 138 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 WRAP73Q9P2S5 460 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-212ENST00000479586 FRYQ5TBA9 3013 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 CEP295Q9C0D2 2601 aa19.34■□□□□ 0.69
HMGN1-212ENST00000479586 CCDC196A0A1B0GTZ2 297 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms