RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KLRC4O43908 158 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 PIGRP01833 764 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 BTG3Q14201 252 aaPredicted RBP29.38■■■□□ 2.29
CCM2-211ENST00000478582 TMEM132AQ24JP5 1023 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 ADPGKQ9BRR6 497 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 TBC1D7Q9P0N9 293 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 IPPQ9Y573 584 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 PCDHB13Q9Y5F0 798 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.37■■■□□ 2.29
CCM2-211ENST00000478582 H3BNC9 293 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 NR1I2O75469 434 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 PROZP22891 400 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 ZC2HC1CQ53FD0 456 aaPredicted RBP29.37■■■□□ 2.29
CCM2-211ENST00000478582 EEF1DP3Q658K8 133 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 MAP4K3Q8IVH8 894 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 ELOA2Q8IYF1 753 aaPredicted RBP29.37■■■□□ 2.29
CCM2-211ENST00000478582 CMTR2Q8IYT2 770 aaKnown RBP29.37■■■□□ 2.29
CCM2-211ENST00000478582 RSPH1Q8WYR4 309 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 TRIM6Q9C030 488 aaPredicted RBP29.37■■■□□ 2.29
CCM2-211ENST00000478582 THEGQ9P2T0 379 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 RWDD3Q9Y3V2 267 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 RALGAPA2Q2PPJ7 1873 aa29.37■■■□□ 2.29
CCM2-211ENST00000478582 TOM1L1O75674 476 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 NPTXRO95502 500 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 LINC00271P0C7V0 271 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 IBSPP21815 317 aaPredicted RBP29.36■■■□□ 2.29
CCM2-211ENST00000478582 DPYDQ12882 1025 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 DCAF4L1Q3SXM0 396 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 APBB1IPQ7Z5R6 666 aaPredicted RBP29.36■■■□□ 2.29
CCM2-211ENST00000478582 RNF169Q8NCN4 708 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 ATXN2LQ8WWM7 1075 aaKnown RBP29.36■■■□□ 2.29
CCM2-211ENST00000478582 CLP1Q92989 425 aaKnown RBP29.36■■■□□ 2.29
CCM2-211ENST00000478582 TMEM117Q9H0C3 514 aa29.36■■■□□ 2.29
CCM2-211ENST00000478582 C5orf67F2Z3F1 127 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 ABLIM1O14639 778 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 GCNT3O95395 438 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 RB1P06400 928 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 FGFR1P11362 822 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 BMPR1AP36894 532 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 GPM6BQ13491 265 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 FAM26FQ5R3K3 315 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 AGMOQ6ZNB7 445 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 HACE1Q8IYU2 909 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 UBN1Q9NPG3 1134 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 A0A0C4DFX4 3053 aa29.35■■■□□ 2.29
CCM2-211ENST00000478582 PRR29P0C7W0 189 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 ITGA4P13612 1032 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 CASP5P51878 434 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 POSTNQ15063 836 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 SKIV2LQ15477 1246 aaKnown RBP29.34■■■□□ 2.29
CCM2-211ENST00000478582 CLLU1OSQ5K130 101 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 L1TD1Q5T7N2 865 aaKnown RBP29.34■■■□□ 2.29
CCM2-211ENST00000478582 MPZL3Q6UWV2 235 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 STXBP4Q6ZWJ1 553 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 LPPQ93052 612 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 CASD1Q96PB1 797 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 FGFBP2Q9BYJ0 223 aa29.34■■■□□ 2.29
CCM2-211ENST00000478582 MEIS3P2A8K0S8 358 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 MYBP10242 640 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 MCF2P10911 925 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 CTNNB1P35222 781 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 GATMP50440 423 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 PSMD2Q13200 908 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 KMT5BQ4FZB7 885 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 EPM2AIP1Q7L775 607 aaPredicted RBP29.33■■■□□ 2.29
CCM2-211ENST00000478582 HPS3Q969F9 1004 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 ACCSQ96QU6 501 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 CDT1Q9H211 546 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 RNF39Q9H2S5 420 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 NXF3Q9H4D5 531 aaKnown RBP29.33■■■□□ 2.29
CCM2-211ENST00000478582 EXOC7Q9UPT5 735 aa29.33■■■□□ 2.29
CCM2-211ENST00000478582 TBKBP1A7MCY6 615 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 HNRNPDLO14979 420 aaKnown RBP29.32■■■□□ 2.28
CCM2-211ENST00000478582 KINO60870 393 aaKnown RBP29.32■■■□□ 2.28
CCM2-211ENST00000478582 OFD1O75665 1012 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 RPN1P04843 607 aaKnown RBP29.32■■■□□ 2.28
CCM2-211ENST00000478582 LIG4P49917 911 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 PTPROQ16827 1216 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 ZNF568Q3ZCX4 644 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 ABI1Q8IZP0 508 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 MRPL38Q96DV4 380 aaKnown RBP29.32■■■□□ 2.28
CCM2-211ENST00000478582 BICD1Q96G01 975 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 ZBTB45Q96K62 511 aaPredicted RBP29.32■■■□□ 2.28
CCM2-211ENST00000478582 TCHPQ9BT92 498 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 COL25A1Q9BXS0 654 aaPredicted RBP29.32■■■□□ 2.28
CCM2-211ENST00000478582 RSAD1Q9HA92 442 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 LMBRD1Q9NUN5 540 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 GIT1Q9Y2X7 761 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 HES2Q9Y543 173 aa29.32■■■□□ 2.28
CCM2-211ENST00000478582 ZMYM2Q9UBW7 1377 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 INPPL1O15357 1258 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 EIF3DO15371 548 aaKnown RBP eCLIP29.31■■■□□ 2.28
CCM2-211ENST00000478582 MRPS5P82675 430 aaKnown RBP29.31■■■□□ 2.28
CCM2-211ENST00000478582 MCL1Q07820 350 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 TJAP1Q5JTD0 557 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 GLB1LQ6UWU2 654 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 ZNF507Q8TCN5 953 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 HELQQ8TDG4 1101 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 EXOC1Q9NV70 894 aa29.31■■■□□ 2.28
CCM2-211ENST00000478582 HOOK1Q9UJC3 728 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms