RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 ARP10275 920 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 TGFB3P10600 412 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 CKBP12277 381 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 MARK3P27448 753 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 PDIA3P30101 505 aaKnown RBP9.02□□□□□ -0.97
CHD6-207ENST00000476641 PTPN11Q06124 597 aaPredicted RBP9.02□□□□□ -0.97
CHD6-207ENST00000476641 STK3Q13188 491 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 NTRK3Q16288 839 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 PFKFB3Q16875 520 aaPredicted RBP9.02□□□□□ -0.97
CHD6-207ENST00000476641 EXOSC6Q5RKV6 272 aaKnown RBP9.02□□□□□ -0.97
CHD6-207ENST00000476641 ZNF618Q5T7W0 954 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 KCNV1Q6PIU1 500 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 LRRC8DQ7L1W4 858 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 AGBL5Q8NDL9 886 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 TTC16Q8NEE8 873 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 CLP1Q92989 425 aaKnown RBP9.02□□□□□ -0.97
CHD6-207ENST00000476641 AIFM3Q96NN9 605 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 YIPF2Q9BWQ6 316 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 SLC26A6Q9BXS9 759 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 SEZ6LQ9BYH1 1024 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 KRTAP4-9Q9BYQ8 210 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 ANO3Q9BYT9 981 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 AGXT2Q9BYV1 514 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 FTOQ9C0B1 505 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD6-207ENST00000476641 SETD4Q9NVD3 440 aa9.02□□□□□ -0.97
CHD6-207ENST00000476641 GSTTP1A0A1W2PQM5 241 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 H3BRB1 525 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 EDIL3O43854 480 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 CTSHP09668 335 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 SCG2P13521 617 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 TCF7P36402 384 aaPredicted RBP9.01□□□□□ -0.97
CHD6-207ENST00000476641 ITGB3BPQ13352 177 aaPredicted RBP9.01□□□□□ -0.97
CHD6-207ENST00000476641 MTMR1Q13613 665 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 NEDD9Q14511 834 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 RUFY4Q6ZNE9 571 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 RUFY3Q7L099 469 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 NLRX1Q86UT6 975 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 USP38Q8NB14 1042 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 RETREG2Q8NC44 543 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 GPRASP2Q96D09 838 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 PCYT2Q99447 389 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 KATNAL1Q9BW62 490 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 PRDM12Q9H4Q4 367 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 ZNF576Q9H609 170 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 TUT1Q9H6E5 874 aaKnown RBP9.01□□□□□ -0.97
CHD6-207ENST00000476641 SOX17Q9H6I2 414 aaPredicted RBP9.01□□□□□ -0.97
CHD6-207ENST00000476641 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 VPS54Q9P1Q0 977 aa9.01□□□□□ -0.97
CHD6-207ENST00000476641 NID2Q14112 1375 aa9□□□□□ -0.97
CHD6-207ENST00000476641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9□□□□□ -0.97
CHD6-207ENST00000476641 C17orf102A2RUQ5 167 aa9□□□□□ -0.97
CHD6-207ENST00000476641 EPOPA6NHQ4 379 aa9□□□□□ -0.97
CHD6-207ENST00000476641 FAM86B1E9PN63 330 aa9□□□□□ -0.97
CHD6-207ENST00000476641 DDX39AO00148 427 aaKnown RBP9□□□□□ -0.97
CHD6-207ENST00000476641 STAM2O75886 525 aa9□□□□□ -0.97
CHD6-207ENST00000476641 PDGFAP04085 211 aa9□□□□□ -0.97
CHD6-207ENST00000476641 FAM86B2P0C5J1 330 aa9□□□□□ -0.97
CHD6-207ENST00000476641 ATP2A2P16615 1042 aaKnown RBP9□□□□□ -0.97
CHD6-207ENST00000476641 PSMA5P28066 241 aa9□□□□□ -0.97
CHD6-207ENST00000476641 HOXC8P31273 242 aa9□□□□□ -0.97
CHD6-207ENST00000476641 THPOP40225 353 aa9□□□□□ -0.97
CHD6-207ENST00000476641 RCAN1P53805 252 aa9□□□□□ -0.97
CHD6-207ENST00000476641 DEFB103AP81534 67 aa9□□□□□ -0.97
CHD6-207ENST00000476641 ARHGAP4P98171 946 aa9□□□□□ -0.97
CHD6-207ENST00000476641 SOX4Q06945 474 aaPredicted RBP9□□□□□ -0.97
CHD6-207ENST00000476641 BFSP2Q13515 415 aa9□□□□□ -0.97
CHD6-207ENST00000476641 XRRA1Q6P2D8 792 aa9□□□□□ -0.97
CHD6-207ENST00000476641 SERINC5Q86VE9 423 aa9□□□□□ -0.97
CHD6-207ENST00000476641 RPUSD2Q8IZ73 545 aaKnown RBP9□□□□□ -0.97
CHD6-207ENST00000476641 ASAP3Q8TDY4 903 aa9□□□□□ -0.97
CHD6-207ENST00000476641 LMBR1Q8WVP7 490 aa9□□□□□ -0.97
CHD6-207ENST00000476641 EZH1Q92800 747 aaPredicted RBP9□□□□□ -0.97
CHD6-207ENST00000476641 ATP6V0A1Q93050 837 aa9□□□□□ -0.97
CHD6-207ENST00000476641 SENP7Q9BQF6 1050 aa9□□□□□ -0.97
CHD6-207ENST00000476641 MXRA8Q9BRK3 442 aa9□□□□□ -0.97
CHD6-207ENST00000476641 CERS4Q9HA82 394 aa9□□□□□ -0.97
CHD6-207ENST00000476641 AGO4Q9HCK5 861 aaKnown RBP9□□□□□ -0.97
CHD6-207ENST00000476641 KCNH7Q9NS40 1196 aa9□□□□□ -0.97
CHD6-207ENST00000476641 SLC4A7Q9Y6M7 1214 aa9□□□□□ -0.97
CHD6-207ENST00000476641 DOCK5Q9H7D0 1870 aa9□□□□□ -0.97
CHD6-207ENST00000476641 LCHNA4D1U4 455 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 RFXAPO00287 272 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 PRPF3O43395 683 aaKnown RBP8.99□□□□□ -0.97
CHD6-207ENST00000476641 ATG7O95352 703 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 CCNE2O96020 404 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 CA3P07451 260 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 ESRRAP11474 423 aaPredicted RBP8.99□□□□□ -0.97
CHD6-207ENST00000476641 FOSL2P15408 326 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 SREBF1P36956 1147 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 EVCP57679 992 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 IGBP1P78318 339 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 GSTM4Q03013 218 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 RBL2Q08999 1139 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 FBXL16Q8N461 479 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 SLC17A8Q8NDX2 589 aa8.99□□□□□ -0.97
CHD6-207ENST00000476641 MAFAQ8NHW3 353 aaPredicted RBP8.99□□□□□ -0.97
CHD6-207ENST00000476641 CAGE1Q8TC20 777 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms