RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CSRNP2Q9H175 543 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 TCF7L1Q9HCS4 588 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 SAP30BPQ9UHR5 308 aaKnown RBP6.51□□□□□ -1.37
PTCD3-211ENST00000476215 INTUQ9ULD6 942 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 ANKRD6Q9Y2G4 727 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 SLC26A4O43511 780 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 CDC14BO60729 498 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 PHF2O75151 1096 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 SCGB1D2O95969 90 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 PPP3CAQ08209 521 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 GAGE13Q4V321 117 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 CRIP3Q6Q6R5 217 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 CHPFQ8IZ52 775 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 SH3RF3Q8TEJ3 882 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-211ENST00000476215 RABGGTAQ92696 567 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 DPF2Q92785 391 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 PLA2G12BQ9BX93 195 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 NELFAQ9H3P2 528 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 RCAN3Q9UKA8 241 aa6.5□□□□□ -1.37
PTCD3-211ENST00000476215 MTSS1O43312 755 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 ECHS1P30084 290 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 WNT3AP56704 352 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 ZXDAP98168 799 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 DUSP2Q05923 314 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 SAFB2Q14151 953 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTCD3-211ENST00000476215 SPRED1Q7Z699 444 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 GPR135Q8IZ08 494 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 SHCBP1Q8NEM2 672 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 ZNF480Q8WV37 535 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 COA7Q96BR5 231 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 CAMKK2Q96RR4 588 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 GPHA2Q96T91 129 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 SERPINB13Q9UIV8 391 aa6.49□□□□□ -1.37
PTCD3-211ENST00000476215 NOB1Q9ULX3 412 aaKnown RBP6.49□□□□□ -1.37
PTCD3-211ENST00000476215 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 NRP1O14786 923 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 TSPAN6O43657 245 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 PARNO95453 639 aaKnown RBP6.48□□□□□ -1.37
PTCD3-211ENST00000476215 VCAM1P19320 739 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 ADAM8P78325 824 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 MGAT2Q10469 447 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 RIN1Q13671 783 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 PRKD1Q15139 912 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-211ENST00000476215 MST1LQ2TV78 715 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 GJC2Q5T442 439 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-211ENST00000476215 TPH2Q8IWU9 490 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 CMTM4Q8IZR5 234 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 OR5M3Q8NGP4 307 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-211ENST00000476215 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 LIMCH1Q9UPQ0 1083 aa6.48□□□□□ -1.37
PTCD3-211ENST00000476215 CCDC154A6NI56 674 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 FAM171A2A8MVW0 826 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 ITGA10O75578 1167 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 RFPL1O75677 317 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 GYPEP15421 78 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 CASRP41180 1078 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 WASP42768 502 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 NPEPPSP55786 919 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 PER3P56645 1201 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 SPDYAQ5MJ70 313 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 Q6ZVL8 140 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 MIGA2Q7L4E1 593 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 ADGRE4PQ86SQ3 457 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 Q8N1X5 172 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 OR2I1PQ8NGU4 316 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 TSR2Q969E8 191 aaKnown RBP6.47□□□□□ -1.37
PTCD3-211ENST00000476215 UHRF1Q96T88 793 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-211ENST00000476215 C7orf25Q9BPX7 421 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 ZNF747Q9BV97 191 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 TMPRSS5Q9H3S3 457 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 AGO3Q9H9G7 860 aaKnown RBP6.47□□□□□ -1.37
PTCD3-211ENST00000476215 GPRC5DQ9NZD1 345 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 CHPF2Q9P2E5 772 aa6.47□□□□□ -1.37
PTCD3-211ENST00000476215 PNMA8BQ9ULN7 279 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-211ENST00000476215 UBE2QL1A1L167 161 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 HTRA2O43464 458 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-211ENST00000476215 ENDOD1O94919 500 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 TACR2P21452 398 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 CYP2C19P33261 490 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 SEPT2Q15019 361 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 RRP12Q5JTH9 1297 aaKnown RBP6.46□□□□□ -1.38
PTCD3-211ENST00000476215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.46□□□□□ -1.38
PTCD3-211ENST00000476215 HOXB13Q92826 284 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-211ENST00000476215 HDAC10Q969S8 669 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 OR14A2Q96R54 314 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 CDC5LQ99459 802 aaKnown RBP6.46□□□□□ -1.38
PTCD3-211ENST00000476215 PLA2G3Q9NZ20 509 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 TRPS1Q9UHF7 1281 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 IPPQ9Y573 584 aa6.46□□□□□ -1.38
PTCD3-211ENST00000476215 ADCY6O43306 1168 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 MARCH6O60337 910 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 GASTP01350 101 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 ACO1P21399 889 aaKnown RBP6.45□□□□□ -1.38
PTCD3-211ENST00000476215 EDNRBP24530 442 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 CRHR1P34998 444 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 FOXL1Q12952 345 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 C3orf36Q3SXR2 165 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms