RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CLUL1Q15846 466 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 TBR1Q16650 682 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 BRDTQ58F21 947 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 ZBTB46Q86UZ6 589 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 PNMA8AQ86V59 439 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 ANKRD35Q8N283 1001 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 CBARPQ8N350 705 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 GLB1L3Q8NCI6 653 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 TGFBRAP1Q8WUH2 860 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 SNX33Q8WV41 574 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 ARL8AQ96BM9 186 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 FAXDC2Q96IV6 333 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 DPYSL5Q9BPU6 564 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 TCF25Q9BQ70 676 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 PLA2G12BQ9BX93 195 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 ASPSCR1Q9BZE9 553 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 MAGEL2Q9UJ55 1249 aa4.39□□□□□ -1.71
ECHDC1-213ENST00000474240 MATN2O00339 956 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 IPO13O94829 963 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 RPLP2P05387 115 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 ADH4P08319 380 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 COMTP21964 271 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 CTSSP25774 331 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 ECHS1P30084 290 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 IARSP41252 1262 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 RECQLP46063 649 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 MGAT2Q10469 447 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 ABCB5Q2M3G0 1257 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 MST1LQ2TV78 715 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 METTL24Q5JXM2 366 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 TMEM240Q5SV17 173 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 PIK3C3Q8NEB9 887 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 GPR156Q8NFN8 814 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 TSPEARQ8WU66 669 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 CYFIP2Q96F07 1278 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 FUBP3Q96I24 572 aaKnown RBP eCLIP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 OR14A2Q96R54 314 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 CDC5LQ99459 802 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 PDCD2LQ9BRP1 358 aa4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 AURKAIP1Q9NWT8 199 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-213ENST00000474240 TEX33O43247 280 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 XPOTO43592 962 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 TMEM127O75204 238 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 MT-CO1P00395 513 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 WASP42768 502 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 GZMKP49863 264 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 NEK2P51955 445 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 EPHB1P54762 984 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 ADKP55263 362 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 ADAM8P78325 824 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 CDK17Q00537 523 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 DUSP8Q13202 625 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 GRM7Q14831 915 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 UBE3CQ15386 1083 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 PTPN21Q16825 1174 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 EFCAB2Q5VUJ9 269 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 FAM111BQ6SJ93 734 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 MIGA2Q7L4E1 593 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 APBB1IPQ7Z5R6 666 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 LARP4BQ92615 738 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 EDAQ92838 391 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 IL17RAQ96F46 866 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 RPL10LQ96L21 214 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 PLEKHG4BQ96PX9 1271 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 CAMKK2Q96RR4 588 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 GPHA2Q96T91 129 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 NUP88Q99567 741 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 MANSC1Q9H8J5 431 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 BCO1Q9HAY6 547 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 PLA2G3Q9NZ20 509 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 SCOCQ9UIL1 159 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 DMRT1Q9Y5R6 373 aa4.37□□□□□ -1.71
ECHDC1-213ENST00000474240 B5MCH6 92 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 PLSCR1O15162 318 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 AKR1B10O60218 316 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 DTNBO60941 627 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 MFAP3LO75121 409 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 U2AF1L5P0DN76 240 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 GNAT2P19087 354 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 MCAMP43121 646 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 EVA1CP58658 441 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 KRTAP10-9P60411 292 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 U2AF1Q01081 240 aaKnown RBP eCLIP4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 ACAP2Q15057 778 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 ATP2B3Q16720 1220 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 FKBP15Q5T1M5 1219 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 PPP4R3AQ6IN85 833 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 PCSK4Q6UW60 755 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 C1orf210Q8IVY1 113 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 CMIPQ8IY22 773 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 GPR135Q8IZ08 494 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 FUKQ8N0W3 1084 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 OR7D4Q8NG98 312 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 CACTINQ8WUQ7 758 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 RIN2Q8WYP3 895 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 MIEF2Q96C03 454 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 SMAD5Q99717 465 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 PCGF6Q9BYE7 350 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 MMRN2Q9H8L6 949 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms