RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 UBA1P22314 1058 aaKnown RBP22.82■■□□□ 1.24
RNF220-209ENST00000474064 ACTN3Q08043 901 aaPredicted RBP22.82■■□□□ 1.24
RNF220-209ENST00000474064 PREPLQ4J6C6 727 aaPredicted RBP22.82■■□□□ 1.24
RNF220-209ENST00000474064 PHLDB3Q6NSJ2 640 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 EMBQ6PCB8 327 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 POLR3FQ9H1D9 316 aaPredicted RBP22.82■■□□□ 1.24
RNF220-209ENST00000474064 ATP6V0A4Q9HBG4 840 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 APEX2Q9UBZ4 518 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 SNX12Q9UMY4 172 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 EXOC7Q9UPT5 735 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 CNMDO75829 334 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 SEC24CP53992 1094 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 Q3C1V9 767 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 CCDC13Q8IYE1 715 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 ZNF473Q8WTR7 871 aaKnown RBP22.82■■□□□ 1.24
RNF220-209ENST00000474064 TMEM143Q96AN5 459 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 MIEF2Q96C03 454 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 SYNGAP1Q96PV0 1343 aa22.82■■□□□ 1.24
RNF220-209ENST00000474064 POLGP54098 1239 aaPredicted RBP22.81■■□□□ 1.24
RNF220-209ENST00000474064 IFT88Q13099 833 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 XKR3Q5GH77 459 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 C1orf220Q5T0J3 134 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 MAP4K3Q8IVH8 894 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 C12orf56Q8IXR9 622 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 STK33Q9BYT3 514 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 SMARCAL1Q9NZC9 954 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 NAGPAQ9UK23 515 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 PALMO75781 387 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 SOX5P35711 763 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 NAB2Q15742 525 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 SNRNP35Q16560 246 aaKnown RBP22.81■■□□□ 1.24
RNF220-209ENST00000474064 ALKBH5Q6P6C2 394 aaKnown RBP22.81■■□□□ 1.24
RNF220-209ENST00000474064 MCPH1Q8NEM0 835 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 POP1Q99575 1024 aaKnown RBP22.81■■□□□ 1.24
RNF220-209ENST00000474064 WDR81Q562E7 1941 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 CXCL11O14625 94 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 RASSF9O75901 435 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 ICAM3P32942 547 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 PRKCIP41743 596 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 USP50Q70EL3 339 aaPredicted RBP22.81■■□□□ 1.24
RNF220-209ENST00000474064 BICD1Q96G01 975 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 PDLIM7Q9NR12 457 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 STIM2Q9P246 746 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 AGTPBP1Q9UPW5 1226 aa22.81■■□□□ 1.24
RNF220-209ENST00000474064 IGSF9BQ9UPX0 1349 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 FTCDO95954 541 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 FERP16591 822 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 LY6KQ17RY6 165 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 CEP85LQ5SZL2 805 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 SLC39A4Q6P5W5 647 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 SLC17A8Q8NDX2 589 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 LMO3Q8TAP4 145 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 POMGNT1Q8WZA1 660 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 GPR88Q9GZN0 384 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 UBE2TQ9NPD8 197 aaPredicted RBP22.8■■□□□ 1.24
RNF220-209ENST00000474064 HNRNPDLO14979 420 aaKnown RBP22.8■■□□□ 1.24
RNF220-209ENST00000474064 EMC2Q15006 297 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 RNF10Q8N5U6 811 aaKnown RBP22.8■■□□□ 1.24
RNF220-209ENST00000474064 U2AF1L4Q8WU68 220 aaKnown RBP22.8■■□□□ 1.24
RNF220-209ENST00000474064 IFT74Q96LB3 600 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 CCT8L2Q96SF2 557 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 ZNF408Q9H9D4 720 aa22.8■■□□□ 1.24
RNF220-209ENST00000474064 TMCO5BA8MYB1 307 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 OATP04181 439 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 KDM7AQ6ZMT4 941 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 CEP57Q86XR8 500 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 ARHGEF19Q8IW93 802 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 SPIRE2Q8WWL2 714 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 OSBPL9Q96SU4 736 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 EHD2Q9NZN4 543 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 RBPJLQ9UBG7 517 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 PACSIN2Q9UNF0 486 aaPredicted RBP22.79■■□□□ 1.24
RNF220-209ENST00000474064 MAFBQ9Y5Q3 323 aaPredicted RBP22.79■■□□□ 1.24
RNF220-209ENST00000474064 DDX3XO00571 662 aaKnown RBP eCLIP22.79■■□□□ 1.246e-9■■■□□ 17.9
RNF220-209ENST00000474064 FARP2O94887 1054 aaPredicted RBP22.79■■□□□ 1.24
RNF220-209ENST00000474064 MAP2K1Q02750 393 aaPredicted RBP22.79■■□□□ 1.24
RNF220-209ENST00000474064 PTPROQ16827 1216 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 VPS36Q86VN1 386 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 GLYCTKQ8IVS8 523 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 ELMO3Q96BJ8 720 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 NTPCRQ9BSD7 190 aaKnown RBP22.79■■□□□ 1.24
RNF220-209ENST00000474064 SLC40A1Q9NP59 571 aa22.79■■□□□ 1.24
RNF220-209ENST00000474064 CDR1P51861 262 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 CETN1Q12798 172 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 TLR10Q9BXR5 811 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 TMEM117Q9H0C3 514 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 SEPT11Q9NVA2 429 aaKnown RBP22.78■■□□□ 1.24
RNF220-209ENST00000474064 ZNF233A6NK53 670 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 FOXN3O00409 490 aaPredicted RBP22.78■■□□□ 1.24
RNF220-209ENST00000474064 SATB1Q01826 763 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 PPIL2Q13356 520 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 PTGISQ16647 500 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 MYCBPAPQ8TBZ2 947 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 CAVIN3Q969G5 261 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 FAM84AQ96KN4 292 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 C17orf75Q9HAS0 396 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 TOPORSQ9NS56 1045 aaPredicted RBP22.78■■□□□ 1.24
RNF220-209ENST00000474064 KCNH4Q9UQ05 1017 aa22.78■■□□□ 1.24
RNF220-209ENST00000474064 PAPPA2Q9BXP8 1791 aa22.77■■□□□ 1.24
RNF220-209ENST00000474064 GSTTP1A0A1W2PQM5 241 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms