RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 MTSS1LQ765P7 747 aa18.17■□□□□ 0.5
HPS4-210ENST00000473782 SLC5A5Q92911 643 aa18.17■□□□□ 0.5
HPS4-210ENST00000473782 ZMYND12Q9H0C1 365 aa18.17■□□□□ 0.5
HPS4-210ENST00000473782 SEMA4GQ9NTN9 838 aa18.17■□□□□ 0.5
HPS4-210ENST00000473782 RBM28Q9NW13 759 aaKnown RBP18.17■□□□□ 0.5
HPS4-210ENST00000473782 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
HPS4-210ENST00000473782 FBXW11Q9UKB1 542 aa18.17■□□□□ 0.5
HPS4-210ENST00000473782 SLC27A2O14975 620 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 CHMP2AO43633 222 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 RETP07949 1114 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 CDC27P30260 824 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 DNM2P50570 870 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 SCNN1GP51170 649 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 PFKPQ01813 784 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 FUT10Q6P4F1 479 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 ANO5Q75V66 913 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 ZFP42Q96MM3 310 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 NELL2Q99435 816 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 RIT2Q99578 217 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 EIF2AQ9BY44 585 aaKnown RBP18.16■□□□□ 0.5
HPS4-210ENST00000473782 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.16■□□□□ 0.5
HPS4-210ENST00000473782 TCEAL9Q9UHQ7 104 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 IPPQ9Y573 584 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 F5P12259 2224 aa18.16■□□□□ 0.5
HPS4-210ENST00000473782 ANKRD11Q6UB99 2663 aaPredicted RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 ESYT2A0FGR8 921 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 TM4SF5O14894 197 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 LRP3O75074 770 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 PSMD10O75832 226 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 SFNP31947 248 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 MLH1P40692 756 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 JAK3P52333 1124 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 SHC2P98077 582 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 ADCY1Q08828 1119 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 PFKFB3Q16875 520 aaPredicted RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 USP41Q3LFD5 358 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 RTP2Q5QGT7 225 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 N4BP2L1Q5TBK1 243 aaPredicted RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 PRSS55Q6UWB4 352 aaPredicted RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 PRR23CQ6ZRP0 262 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 NPAS3Q8IXF0 933 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 CELF5Q8N6W0 485 aaKnown RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 ZNF579Q8NAF0 562 aaKnown RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 CLSTN3Q9BQT9 956 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
HPS4-210ENST00000473782 HEBP1Q9NRV9 189 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 HES2Q9Y543 173 aa18.15■□□□□ 0.5
HPS4-210ENST00000473782 ADAM12O43184 909 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 HNRNPA1P09651 372 aaKnown RBP eCLIP18.14■□□□□ 0.49
HPS4-210ENST00000473782 CSRP2Q16527 193 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 RTN1Q16799 776 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 RABGGTAQ92696 567 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 CHRDQ9H2X0 955 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 HCFC1R1Q9NWW0 138 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 CACNG4Q9UBN1 327 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 COL4A3BPQ9Y5P4 624 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 WDFY3Q8IZQ1 3526 aa18.14■□□□□ 0.49
HPS4-210ENST00000473782 NRG2O14511 850 aaPredicted RBP18.13■□□□□ 0.49
HPS4-210ENST00000473782 CCL16O15467 120 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 HRO43593 1189 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 GAS7O60861 476 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 ITGA4P13612 1032 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 PLA2G4FQ68DD2 849 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 ZNF852Q6ZMS4 543 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 SRGAP1Q7Z6B7 1085 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 PRPF31Q8WWY3 499 aaKnown RBP18.13■□□□□ 0.49
HPS4-210ENST00000473782 COLEC11Q9BWP8 271 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 UBN1Q9NPG3 1134 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 DNMT3BQ9UBC3 853 aaKnown RBP18.13■□□□□ 0.49
HPS4-210ENST00000473782 ADAM28Q9UKQ2 775 aa18.13■□□□□ 0.49
HPS4-210ENST00000473782 DDX11L8A8MPP1 907 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 NCAM2O15394 837 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 C8AP07357 584 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 HOXA9P31269 272 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 EXOSC10Q01780 885 aaKnown RBP18.12■□□□□ 0.49
HPS4-210ENST00000473782 DMWDQ09019 674 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 LRCH2Q5VUJ6 765 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 REXO1Q8N1G1 1221 aaKnown RBP18.12■□□□□ 0.49
HPS4-210ENST00000473782 RDM1Q8NG50 284 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 LNX1Q8TBB1 728 aaPredicted RBP18.12■□□□□ 0.49
HPS4-210ENST00000473782 CCDC136Q96JN2 1154 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 PAAF1Q9BRP4 392 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 TEKT3Q9BXF9 490 aa18.12■□□□□ 0.49
HPS4-210ENST00000473782 SH2B1Q9NRF2 756 aaPredicted RBP18.12■□□□□ 0.49
HPS4-210ENST00000473782 ECI2O75521 394 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 POU2F2P09086 479 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 SRGAP2CP0DJJ0 459 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 NPEPPSP55786 919 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 SRSF5Q13243 272 aaKnown RBP18.11■□□□□ 0.49
HPS4-210ENST00000473782 GAS6Q14393 721 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 MIER3Q7Z3K6 550 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 CNNM3Q8NE01 707 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 TMEM143Q96AN5 459 aa18.11■□□□□ 0.49
HPS4-210ENST00000473782 ZBTB43O43298 467 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms