RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 VTNP04004 478 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 ADRB2P07550 413 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 GRK4P32298 578 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 NLRP11P59045 1033 aaKnown RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 MYL7Q01449 175 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 MCL1Q07820 350 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 NCBP1Q09161 790 aaKnown RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 NOLC1Q14978 699 aaKnown RBP eCLIP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 PSMD6Q15008 389 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 TMEM132AQ24JP5 1023 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 MPZL3Q6UWV2 235 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 CYP26C1Q6V0L0 522 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 CBWD2Q8IUF1 395 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 PARD3BQ8TEW8 1205 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 FDXACB1Q9BRP7 624 aaPredicted RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 TCHPQ9BT92 498 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 MCOLN1Q9GZU1 580 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 HMX1Q9NP08 348 aaPredicted RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 KCND1Q9NSA2 647 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 FAM207AQ9NSI2 230 aaPredicted RBP13.94□□□□□ -0.18
VPS13D-205ENST00000473099 GCNT4Q9P109 453 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 ANKFY1Q9P2R3 1169 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 GOLGA8IPA6NC78 632 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 MYADML2A6NDP7 307 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 GOLGA8JA6NMD2 632 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 ERLIN2O94905 339 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 PROZP22891 400 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 HNRNPH3P31942 346 aaKnown RBP13.93□□□□□ -0.18
VPS13D-205ENST00000473099 MXI1P50539 228 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 AP3M2P53677 418 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 CDK17Q00537 523 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 PTPN11Q06124 597 aaPredicted RBP13.93□□□□□ -0.18
VPS13D-205ENST00000473099 RSPH3Q86UC2 560 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 TMEM139Q8IV31 216 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 SYN2Q92777 582 aaPredicted RBP13.93□□□□□ -0.18
VPS13D-205ENST00000473099 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 FAM213AQ9BRX8 229 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 PYCARDQ9ULZ3 195 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
VPS13D-205ENST00000473099 MOXD2PA6NHM9 499 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 INHAP05111 366 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 ASGR1P07306 291 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 GJB1P08034 283 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 MCF2P10911 925 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 PON1P27169 355 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 AXLP30530 894 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 KLK7P49862 253 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 CLDN10P78369 228 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 IRX5P78411 483 aaPredicted RBP13.92□□□□□ -0.18
VPS13D-205ENST00000473099 KCNA10Q16322 511 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 MEA1Q16626 185 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 ZNF568Q3ZCX4 644 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 KRT39Q6A163 491 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 CCSAPQ6IQ19 270 aaPredicted RBP13.92□□□□□ -0.18
VPS13D-205ENST00000473099 CXCL17Q6UXB2 119 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 BRSK2Q8IWQ3 736 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 FAM81BQ96LP2 452 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 ADPGKQ9BRR6 497 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
VPS13D-205ENST00000473099 GANQ9H2C0 597 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 RBAKQ9NYW8 714 aaPredicted RBP13.92□□□□□ -0.18
VPS13D-205ENST00000473099 PLAGL2Q9UPG8 496 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 TRIM17Q9Y577 477 aa13.92□□□□□ -0.18
VPS13D-205ENST00000473099 M0QZ92 97 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 ABLIM1O14639 778 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 TREHO43280 583 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 ZSCAN12O43309 604 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 GPR32O75388 356 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 EDN1P05305 212 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 AMHR2Q16671 573 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 DCAF4L1Q3SXM0 396 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 KLHDC7AQ5VTJ3 777 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 TRIM65Q6PJ69 517 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 CCDC155Q8N6L0 562 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 ARRDC4Q8NCT1 418 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 ZBTB10Q96DT7 871 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
VPS13D-205ENST00000473099 SEZ6LQ9BYH1 1024 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 ADAMTS10Q9H324 1103 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 MINDY3Q9H8M7 445 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 AGPAT5Q9NUQ2 364 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 COQ4Q9Y3A0 265 aa13.91□□□□□ -0.18
VPS13D-205ENST00000473099 GOLGA6L9A6NEM1 432 aa13.9□□□□□ -0.18
VPS13D-205ENST00000473099 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms