RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 RPL17P18621 184 aaKnown RBP21.26■□□□□ 0.99
SORT1-203ENST00000471996 CD72P21854 359 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 MLH1P40692 756 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 SCNN1GP51170 649 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 CREMQ03060 361 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 PLA2G4FQ68DD2 849 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 FUT10Q6P4F1 479 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 PRPF31Q8WWY3 499 aaKnown RBP21.26■□□□□ 0.99
SORT1-203ENST00000471996 FGF13Q92913 245 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 GMEB2Q9UKD1 530 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 CCDC196A0A1B0GTZ2 297 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 NTHL1P78549 312 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 Q4G0T1 1027 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 TSSK4Q6SA08 328 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 NELL2Q99435 816 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 PRMT8Q9NR22 394 aaPredicted RBP21.25■□□□□ 0.99
SORT1-203ENST00000471996 FBXW11Q9UKB1 542 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 CFAP47Q6ZTR5 3102 aa21.25■□□□□ 0.99
SORT1-203ENST00000471996 NCAM2O15394 837 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 PRPF3O43395 683 aaKnown RBP21.24■□□□□ 0.99
SORT1-203ENST00000471996 HNRNPA1P09651 372 aaKnown RBP eCLIP21.24■□□□□ 0.99
SORT1-203ENST00000471996 TARSP26639 723 aaKnown RBP21.24■□□□□ 0.99
SORT1-203ENST00000471996 RPS9P46781 194 aaKnown RBP21.24■□□□□ 0.99
SORT1-203ENST00000471996 PSMC5P62195 406 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 PSPC1Q8WXF1 523 aaKnown RBP21.24■□□□□ 0.99
SORT1-203ENST00000471996 SLC7A3Q8WY07 619 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 TMEM143Q96AN5 459 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 ZFP42Q96MM3 310 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 ESYT1Q9BSJ8 1104 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 EIF2AQ9BY44 585 aaKnown RBP21.24■□□□□ 0.99
SORT1-203ENST00000471996 FAM126AQ9BYI3 521 aaPredicted RBP21.24■□□□□ 0.99
SORT1-203ENST00000471996 ADAM28Q9UKQ2 775 aa21.24■□□□□ 0.99
SORT1-203ENST00000471996 LAMTOR4Q0VGL1 99 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 ITFG1Q8TB96 612 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 CHAMP1Q96JM3 812 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 PHF20Q9BVI0 1012 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 ANO2Q9NQ90 1003 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 NAP1L2Q9ULW6 460 aaPredicted RBP21.23■□□□□ 0.99
SORT1-203ENST00000471996 HES2Q9Y543 173 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 MIA3Q5JRA6 1907 aa21.23■□□□□ 0.99
SORT1-203ENST00000471996 PATJQ8NI35 1801 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 NPEPPSP55786 919 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 PPM1JQ5JR12 505 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 LIN9Q5TKA1 542 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 PRSS55Q6UWB4 352 aaPredicted RBP21.22■□□□□ 0.99
SORT1-203ENST00000471996 TPRG1Q6ZUI0 275 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 EXOC8Q8IYI6 725 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 CCDC148Q8NFR7 591 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 NETO1Q8TDF5 533 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 CCDC51Q96ER9 411 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 KXD1Q9BQD3 176 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 DHX33Q9H6R0 707 aaKnown RBP21.22■□□□□ 0.99
SORT1-203ENST00000471996 GIT1Q9Y2X7 761 aa21.22■□□□□ 0.99
SORT1-203ENST00000471996 MAP1BP46821 2468 aaKnown RBP21.22■□□□□ 0.99
SORT1-203ENST00000471996 CYP3A7-CYP3A51PA0A087WV96 503 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 SLC30A4O14863 429 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 ERLIN2O94905 339 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 CYP3A7P24462 503 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 AXLP30530 894 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 HOXA9P31269 272 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 FZD5Q13467 585 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 PCBP1Q15365 356 aaKnown RBP eCLIP21.21■□□□□ 0.99
SORT1-203ENST00000471996 RTP2Q5QGT7 225 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 PPM1LQ5SGD2 360 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 NOTUMQ6P988 496 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 ZNF579Q8NAF0 562 aaKnown RBP21.21■□□□□ 0.99
SORT1-203ENST00000471996 RNF149Q8NC42 400 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 GSTCDQ8NEC7 633 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 TBCKQ8TEA7 893 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 CEP170P1Q96L14 293 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 PPME1Q9Y570 386 aa21.21■□□□□ 0.99
SORT1-203ENST00000471996 MYH15Q9Y2K3 1946 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 MTCL1Q9Y4B5 1905 aaKnown RBP21.2■□□□□ 0.98
SORT1-203ENST00000471996 CCL16O15467 120 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 ASAP2O43150 1006 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 TSPAN1O60635 241 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 XYLBO75191 536 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 TADA2AO75478 443 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 TDP2O95551 362 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 C8AP07357 584 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 RFC5P40937 340 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 SPEM2Q0P670 501 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 MTAPQ13126 283 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 ZNF852Q6ZMS4 543 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 ETNPPLQ8TBG4 499 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 CLSTN3Q9BQT9 956 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 APOL6Q9BWW8 343 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 CSRNP2Q9H175 543 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 RAB23Q9ULC3 237 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 POLIQ9UNA4 740 aa21.2■□□□□ 0.98
SORT1-203ENST00000471996 MRPS17Q9Y2R5 130 aaKnown RBP21.2■□□□□ 0.98
SORT1-203ENST00000471996 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.2■□□□□ 0.98
SORT1-203ENST00000471996 QARSP47897 775 aaKnown RBP21.19■□□□□ 0.98
SORT1-203ENST00000471996 AKAP17AQ02040 695 aaKnown RBP21.19■□□□□ 0.98
SORT1-203ENST00000471996 ADCY1Q08828 1119 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 ADCK5Q3MIX3 580 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 TSGA10IPQ3SY00 556 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 FERMT3Q86UX7 667 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 NPAS3Q8IXF0 933 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms