RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FOXR2Q6PJQ5 311 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 OTOP2Q7RTS6 562 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 RTN4RL1Q86UN2 441 aaPredicted RBP16.62■□□□□ 0.25
SNIP1-202ENST00000468040 C12orf56Q8IXR9 622 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 P2RX5Q93086 422 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 ZBTB45Q96K62 511 aaPredicted RBP16.62■□□□□ 0.25
SNIP1-202ENST00000468040 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNIP1-202ENST00000468040 MSTO1Q9BUK6 570 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
SNIP1-202ENST00000468040 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.61■□□□□ 0.25
SNIP1-202ENST00000468040 TISP43B9A030 160 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 EOMESO95936 686 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 AMHP03971 560 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 CCNE1P24864 410 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
SNIP1-202ENST00000468040 ADSSP30520 456 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 KCNJ6P48051 423 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 FAM189BP81408 668 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 MYBPC2Q14324 1141 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 NFIL3Q16649 462 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 EDRF1Q3B7T1 1238 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 TMEM174Q8WUU8 243 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 NELFBQ8WX92 580 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 PGBD4Q96DM1 585 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 GDF15Q99988 308 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 SEMA6BQ9H3T3 888 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 ELAC1Q9H777 363 aaKnown RBP16.61■□□□□ 0.25
SNIP1-202ENST00000468040 AGO2Q9UKV8 859 aaKnown RBP16.61■□□□□ 0.25
SNIP1-202ENST00000468040 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 IPPQ9Y573 584 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 MICAL3Q7RTP6 2002 aa16.61■□□□□ 0.25
SNIP1-202ENST00000468040 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 OGTO15294 1046 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 LDHAP00338 332 aaKnown RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 HARSP12081 509 aaKnown RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 ERCC5P28715 1186 aaPredicted RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 GRM5P41594 1212 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 WDR5P61964 334 aaKnown RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 SLC9A9Q8IVB4 645 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 CBWD1Q9BRT8 395 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 CCDC94Q9BW85 323 aaPredicted RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 UBE2OQ9C0C9 1292 aaKnown RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 NXF3Q9H4D5 531 aaKnown RBP16.6■□□□□ 0.25
SNIP1-202ENST00000468040 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 TMEM161AQ9NX61 479 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 LRFN2Q9ULH4 789 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
SNIP1-202ENST00000468040 RBAK-RBAKDNI3L0D1 243 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 CLIC2O15247 247 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 NR3C1P04150 777 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 ANKRD40Q6AI12 368 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNIP1-202ENST00000468040 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
SNIP1-202ENST00000468040 ZNF598Q86UK7 904 aaKnown RBP16.59■□□□□ 0.25
SNIP1-202ENST00000468040 NPAS4Q8IUM7 802 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
SNIP1-202ENST00000468040 FUCA2Q9BTY2 467 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 UBN1Q9NPG3 1134 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 HSPBP1Q9NZL4 362 aa16.59■□□□□ 0.25
SNIP1-202ENST00000468040 HOXA2O43364 376 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 EXTL3O43909 919 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 FAM189A1O60320 539 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 CLTAP09496 248 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 ITGA4P13612 1032 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 NR2F2P24468 414 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 BMP8BP34820 402 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 CYP2J2P51589 502 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 PMS1P54277 932 aaKnown RBP16.58■□□□□ 0.24
SNIP1-202ENST00000468040 YARSP54577 528 aaKnown RBP16.58■□□□□ 0.24
SNIP1-202ENST00000468040 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
SNIP1-202ENST00000468040 POU5F1Q01860 360 aaKnown RBP16.58■□□□□ 0.24
SNIP1-202ENST00000468040 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 GPD1LQ8N335 351 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 XXYLT1Q8NBI6 393 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 RNF169Q8NCN4 708 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 PHOSPHO2Q8TCD6 241 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 RSPH1Q8WYR4 309 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 ACAP3Q96P50 834 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 SLC9A7Q96T83 725 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 GZF1Q9H116 711 aaPredicted RBP16.58■□□□□ 0.24
SNIP1-202ENST00000468040 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 TOPORSQ9NS56 1045 aaPredicted RBP16.58■□□□□ 0.24
SNIP1-202ENST00000468040 DMAC2Q9NW81 257 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 HES2Q9Y543 173 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 SLC4A7Q9Y6M7 1214 aa16.58■□□□□ 0.24
SNIP1-202ENST00000468040 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 CETN3O15182 167 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 EXOC3O60645 756 aa16.57■□□□□ 0.24
SNIP1-202ENST00000468040 CAVIN2O95810 425 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms