RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 ITGA1P56199 1179 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 RIPK4P57078 832 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 CHRNDQ07001 517 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 MOGSQ13724 837 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 CDSNQ15517 529 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 PRR31Q5SQ13 230 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 CD300LDQ6UXZ3 194 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 CPNE8Q86YQ8 564 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 ZFPM1Q8IX07 1006 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 ZKSCAN4Q969J2 545 aaPredicted RBP5.23□□□□□ -1.57
SSR3-204ENST00000467733 HOOK2Q96ED9 719 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 VPS11Q9H270 941 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 C11orf49Q9H6J7 331 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 CGGBP1Q9UFW8 167 aaPredicted RBP5.23□□□□□ -1.57
SSR3-204ENST00000467733 MRVI1Q9Y6F6 885 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 TRANK1O15050 2925 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 ATAD5Q96QE3 1844 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 PFASO15067 1338 aa5.23□□□□□ -1.57
SSR3-204ENST00000467733 C7orf72A4D263 438 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 TNPO2O14787 897 aaKnown RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 PPP1R11O60927 126 aaPredicted RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 DDX58O95786 925 aaKnown RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 HMGCRP04035 888 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 FUCA1P04066 466 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 TMPOP42166 694 aaKnown RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 NCAPHQ15003 741 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 MFSD14BQ5SR56 506 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 VHLLQ6RSH7 139 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 ADAT2Q7Z6V5 191 aaKnown RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 CIR1Q86X95 450 aaPredicted RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 FAM169BQ8N8A8 192 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 SEC14L1Q92503 715 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 RCC1LQ96I51 464 aaKnown RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 MPHOSPH8Q99549 860 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 CDX2Q99626 313 aaPredicted RBP5.22□□□□□ -1.57
SSR3-204ENST00000467733 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 ACTR10Q9NZ32 417 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 PPP4R1LQ9P1A2 415 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 PRKAG3Q9UGI9 489 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 SIT1Q9Y3P8 196 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 RLFQ13129 1914 aa5.22□□□□□ -1.57
SSR3-204ENST00000467733 NPEPPSL1A6NEC2 478 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 SNAP23O00161 211 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.583e-11■■■■■ 28.2
SSR3-204ENST00000467733 SMAD7O15105 426 aaKnown RBP5.21□□□□□ -1.58
SSR3-204ENST00000467733 B4GALT3O60512 393 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 VAMP4O75379 141 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 IGKV5-2P06315 115 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 FGRP09769 529 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 SLC6A11P48066 632 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 ICAM4Q14773 271 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 FKBP1CQ5VVH2 108 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 UBE3BQ7Z3V4 1068 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 FAM83AQ86UY5 434 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 MCF2L2Q86YR7 1114 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 FAM126BQ8IXS8 530 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 ARHGEF39Q8N4T4 335 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 PLEKHO2Q8TD55 490 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 COA7Q96BR5 231 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 PLA2G12BQ9BX93 195 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 ZNF341Q9BYN7 854 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 SEMA4AQ9H3S1 761 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 TMOD2Q9NZR1 351 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 MARCH2Q9P0N8 246 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 OGDHLQ9ULD0 1010 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 PCDHB10Q9UN67 800 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 MAP3K2Q9Y2U5 619 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 SLC45A1Q9Y2W3 748 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 XIRP2A4UGR9 3374 aa5.21□□□□□ -1.58
SSR3-204ENST00000467733 CXCL11O14625 94 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 TAF5LO75529 589 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 CYP7B1O75881 506 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 CYP1A1P04798 512 aaPredicted RBP5.2□□□□□ -1.58
SSR3-204ENST00000467733 COL6A1P12109 1028 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 FOSL2P15408 326 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 ZNF28P17035 718 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 SELENOPP49908 381 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 CACNB3P54284 484 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 NEXNQ0ZGT2 675 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 FXNQ16595 210 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 FAM110CQ1W6H9 321 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 LRRC26Q2I0M4 334 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 NAALADL2Q58DX5 795 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 CRB2Q5IJ48 1285 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 LARP1BQ659C4 914 aaKnown RBP5.2□□□□□ -1.58
SSR3-204ENST00000467733 KIAA1211LQ6NV74 962 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 CRACR2BQ8N4Y2 399 aaPredicted RBP5.2□□□□□ -1.58
SSR3-204ENST00000467733 FAM26EQ8N5C1 309 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 DNERQ8NFT8 737 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 TDRD7Q8NHU6 1098 aaKnown RBP5.2□□□□□ -1.58
SSR3-204ENST00000467733 MMP19Q99542 508 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 PCED1AQ9H1Q7 454 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 CD248Q9HCU0 757 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 TCAF1Q9Y4C2 921 aa5.2□□□□□ -1.58
SSR3-204ENST00000467733 LAS1LQ9Y4W2 734 aaKnown RBP5.2□□□□□ -1.58
SSR3-204ENST00000467733 MYH2Q9UKX2 1941 aa5.19□□□□□ -1.58
SSR3-204ENST00000467733 TCF20Q9UGU0 1960 aaKnown RBP5.19□□□□□ -1.58
SSR3-204ENST00000467733 ANKRD18BA2A2Z9 1011 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms