RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 UBN1Q9NPG3 1134 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 PRDM6Q9NQX0 595 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 MTUS1Q9ULD2 1270 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 HNRNPDLO14979 420 aaKnown RBP24.61■■□□□ 1.53
C9orf3-209ENST00000460573 EIF3DO15371 548 aaKnown RBP eCLIP24.61■■□□□ 1.53
C9orf3-209ENST00000460573 DGKIO75912 1065 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 SMC2O95347 1197 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 NPTXRO95502 500 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 PROZP22891 400 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 MPZL3Q6UWV2 235 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 ZNF689Q96CS4 500 aaPredicted RBP24.61■■□□□ 1.53
C9orf3-209ENST00000460573 GSDMAQ96QA5 445 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 YME1L1Q96TA2 773 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 EIF2AQ9BY44 585 aaKnown RBP24.61■■□□□ 1.53
C9orf3-209ENST00000460573 TMEM206Q9H813 350 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 RMND1Q9NWS8 449 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 IPPQ9Y573 584 aa24.61■■□□□ 1.53
C9orf3-209ENST00000460573 RHOBTB3O94955 611 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 MYBP10242 640 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 ATF7P17544 494 aaPredicted RBP24.6■■□□□ 1.53
C9orf3-209ENST00000460573 LIG4P49917 911 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 PNOCQ13519 176 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 CDR2LQ86X02 465 aaPredicted RBP24.6■■□□□ 1.53
C9orf3-209ENST00000460573 SMG8Q8ND04 991 aaKnown RBP24.6■■□□□ 1.53
C9orf3-209ENST00000460573 ATXN2LQ8WWM7 1075 aaKnown RBP24.6■■□□□ 1.53
C9orf3-209ENST00000460573 TCHPQ9BT92 498 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 GTPBP4Q9BZE4 634 aaKnown RBP24.6■■□□□ 1.53
C9orf3-209ENST00000460573 USP20Q9Y2K6 914 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 UBE4BO95155 1302 aa24.6■■□□□ 1.53
C9orf3-209ENST00000460573 LCHNA4D1U4 455 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 CLDN3O15551 220 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 MCF2P10911 925 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 ITGA4P13612 1032 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 IBSPP21815 317 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-209ENST00000460573 CASP5P51878 434 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 ZNF568Q3ZCX4 644 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 EEF1DP3Q658K8 133 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 EPM2AIP1Q7L775 607 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-209ENST00000460573 RNF169Q8NCN4 708 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 ZNF507Q8TCN5 953 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 TGS1Q96RS0 853 aaKnown RBP24.59■■□□□ 1.53
C9orf3-209ENST00000460573 RC3H2Q9HBD1 1191 aaKnown RBP24.59■■□□□ 1.53
C9orf3-209ENST00000460573 UNC80Q8N2C7 3258 aa24.59■■□□□ 1.53
C9orf3-209ENST00000460573 MRPS5P82675 430 aaKnown RBP24.58■■□□□ 1.53
C9orf3-209ENST00000460573 SLFN12LQ6IEE8 588 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 CMTR2Q8IYT2 770 aaKnown RBP24.58■■□□□ 1.53
C9orf3-209ENST00000460573 SYCP3Q8IZU3 236 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 SPATA20Q8TB22 786 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 SP7Q8TDD2 431 aaPredicted RBP24.58■■□□□ 1.53
C9orf3-209ENST00000460573 HPS3Q969F9 1004 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 SMARCE1Q969G3 411 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 TMEM117Q9H0C3 514 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 SLC39A2Q9NP94 309 aa24.58■■□□□ 1.53
C9orf3-209ENST00000460573 EYSQ5T1H1 3165 aa24.58■■□□□ 1.52
C9orf3-209ENST00000460573 ZMYM2Q9UBW7 1377 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 ABLIM1O14639 778 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 PRPF6O94906 941 aaKnown RBP24.57■■□□□ 1.52
C9orf3-209ENST00000460573 KIF20AO95235 890 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 MCL1Q07820 350 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 NOLC1Q14978 699 aaKnown RBP eCLIP24.57■■□□□ 1.52
C9orf3-209ENST00000460573 KYAT1Q16773 422 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 ABI1Q8IZP0 508 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 FGFBP2Q9BYJ0 223 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 CDT1Q9H211 546 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 RSAD1Q9HA92 442 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 GIT1Q9Y2X7 761 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 PCDHA5Q9Y5H7 936 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 MTCH2Q9Y6C9 303 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 STYXL1Q9Y6J8 313 aa24.57■■□□□ 1.52
C9orf3-209ENST00000460573 COL4A4P53420 1690 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-209ENST00000460573 COL4A6Q14031 1691 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 EPOPA6NHQ4 379 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 ARHGEF15O94989 841 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 STK4Q13043 487 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 BMT2Q1RMZ1 405 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 AAK1Q2M2I8 961 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 GLB1LQ6UWU2 654 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 AGMOQ6ZNB7 445 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 GDPD5Q8WTR4 605 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 ZBTB45Q96K62 511 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-209ENST00000460573 NXF3Q9H4D5 531 aaKnown RBP24.56■■□□□ 1.52
C9orf3-209ENST00000460573 ANKFY1Q9P2R3 1169 aa24.56■■□□□ 1.52
C9orf3-209ENST00000460573 MBD3O95983 291 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 FGFR1P11362 822 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 MCM4P33991 863 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 GRM5P41594 1212 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 MATR3P43243 847 aaKnown RBP eCLIP24.55■■□□□ 1.523e-6■□□□□ 11.2
C9orf3-209ENST00000460573 SNRPFP62306 86 aaKnown RBP24.55■■□□□ 1.52
C9orf3-209ENST00000460573 KCNA1Q09470 495 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 BTG3Q14201 252 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-209ENST00000460573 ZBTB33Q86T24 672 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 FIBCD1Q8N539 461 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 GLIS3Q8NEA6 775 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 SCFD1Q8WVM8 642 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 LPPQ93052 612 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 CASD1Q96PB1 797 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 CCDC94Q9BW85 323 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-209ENST00000460573 MRPL9Q9BYD2 267 aaKnown RBP24.55■■□□□ 1.52
C9orf3-209ENST00000460573 RNF19AQ9NV58 838 aa24.55■■□□□ 1.52
C9orf3-209ENST00000460573 HES2Q9Y543 173 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms