RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PCDHA3Q9Y5H8 950 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 NFASCO94856 1347 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 TRAPPC3O43617 180 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 SPOPO43791 374 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 FSBPO95073 299 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ECEL1O95672 775 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 GAS8O95995 478 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PSAPP07602 524 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 YY1P25490 414 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 CHRNA5P30532 468 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 GCLMP48507 274 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ATP1A2P50993 1020 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PMS2P54278 862 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PPP3CAQ08209 521 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PTP4A2Q12974 167 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PGM5Q15124 567 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 WDR44Q5JSH3 913 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ARHGEF16Q5VV41 709 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 NAA35Q5VZE5 725 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 MSL1Q68DK7 614 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 KCTD16Q68DU8 428 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 RNF207Q6ZRF8 634 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 GPD1LQ8N335 351 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PPM1KQ8N3J5 372 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 SH2D3CQ8N5H7 860 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ANKS4BQ8N8V4 417 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 MYCBPAPQ8TBZ2 947 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ZNF564Q8TBZ8 553 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ZNF473Q8WTR7 871 aaKnown RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 MAGOHBQ96A72 148 aaKnown RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ZNF653Q96CK0 615 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 VCPIP1Q96JH7 1222 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 MFSD14AQ96MC6 490 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 MOV10L1Q9BXT6 1211 aaKnown RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 TMEM117Q9H0C3 514 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 KMT5AQ9NQR1 393 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 WHRNQ9P202 907 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 SLC12A6Q9UHW9 1150 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 NOCTQ9UK39 431 aaKnown RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 PCDHA10Q9Y5I2 948 aa9.5□□□□□ -0.89
HDAC3-202ENST00000459727 GOLGB1Q14789 3259 aaKnown RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 ASTN2O75129 1339 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-202ENST00000459727 TNS1Q9HBL0 1735 aaKnown RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 C5orf60A6NFR6 353 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 E7EVH7 732 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 DDX39AO00148 427 aaKnown RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 MYO1FO00160 1098 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 C21orf2O43822 256 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 LDHAP00338 332 aaKnown RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ALAS1P13196 640 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ITGA4P13612 1032 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 RARGP13631 454 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 CYP11B1P15538 503 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 AP3M2P53677 418 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 PEX3P56589 373 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 UBXN2AP68543 259 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 MRPS25P82663 173 aaKnown RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 LMNB2Q03252 620 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 UAP1Q16222 522 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 LIN9Q5TKA1 542 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 GKAP1Q5VSY0 366 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 DCAF12L1Q5VU92 463 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ACAD10Q6JQN1 1059 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 FOXR1Q6PIV2 292 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 SLC13A5Q86YT5 568 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 CCDC50Q8IVM0 306 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ARHGEF19Q8IW93 802 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 TMEM161BQ8NDZ6 487 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ATP8B4Q8TF62 1192 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 CD101Q93033 1021 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 TLCD1Q96CP7 247 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ARHGEF26Q96DR7 871 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 AGBL1Q96MI9 1066 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 CCT8L2Q96SF2 557 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 RMDN3Q96TC7 470 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 PLCD4Q9BRC7 762 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 PDCD2LQ9BRP1 358 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 CBWD1Q9BRT8 395 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 NUP85Q9BW27 656 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 CENPHQ9H3R5 247 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 GOLPH3Q9H4A6 298 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 LRRC19Q9H756 370 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
HDAC3-202ENST00000459727 PXMP2Q9NR77 195 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 ZDHHC18Q9NUE0 388 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 RAB20Q9NX57 234 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 PCDHB2Q9Y5E7 798 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 SCINQ9Y6U3 715 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 MYH10P35580 1976 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 MYPNQ86TC9 1320 aa9.49□□□□□ -0.89
HDAC3-202ENST00000459727 DENND3A2RUS2 1198 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 H0YHG0 523 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 NFIBO00712 420 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 BACH1O14867 736 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms